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Assembly Name: biogeco2 v2.0

Name: Aldolase-type TIM barrel

Term: IPR013785  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene12833 biogeco2 v2.0 416
AutoFact: Trytophan synthase alpha subunit, putative n=1 Tax=Ricinus communis RepID=B9S4R8_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
biog2_v2.0_unigene12879 biogeco2 v2.0 408
AutoFact: Similar to CDK5 regulatory subunit-associated protein n=1 Tax=Nicotiana tabacum RepID=Q75WU8_TOBAC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
biog2_v2.0_unigene12945 biogeco2 v2.0 214
AutoFact: Triosephosphate isomerase n=1 Tax=Picea sitchensis RepID=A9NRN6_PICSI 0.0
Blast2go: cytosolic triosephosphate isomerase 0.0
unknown
biog2_v2.0_unigene13114 biogeco2 v2.0 529
AutoFact: Delta-aminolevulinic acid dehydratase n=1 Tax=Picea sitchensis RepID=B8LR35_PICSI 0.0
FL-Next: sp=Delta-aminolevulinic acid dehydratase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: aminolevulinic acid dehydratase 0.0
Internal
biog2_v2.0_unigene13250 biogeco2 v2.0 366
AutoFact: UPF0004 multi-domain protein 1.0e-24
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: cdk5 regulatory subunit-associated protein 1-like 1-like 0.0
Internal
biog2_v2.0_unigene13820 biogeco2 v2.0 294
AutoFact: Probable pyridoxal biosynthesis protein PDX1 n=2 Tax=Spermatophyta RepID=PDX1_GINBI 0.0
Blast2go: protein 0.0
Coding
biog2_v2.0_unigene13854 biogeco2 v2.0 551
AutoFact: 3-dehydroquinate dehydratase/shikimate 5-dehydrogenase [Juglans regia] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: bifunctional 3-dehydroquinate dehydratase shikimate chloroplastic-like 0.0
Internal
biog2_v2.0_unigene13981 biogeco2 v2.0 428
AutoFact: BBMII isomerase [Arabidopsis thaliana] 0.0
FL-Next: sp=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase 0.0
C-terminus
biog2_v2.0_unigene14234 biogeco2 v2.0 455
AutoFact: 12-oxophytodienoate reductase 7 n=3 Tax=BEP clade RepID=OPR7_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 12-oxophytodienoate reductase 3 0.0
Putative N-terminus
biog2_v2.0_unigene14487 biogeco2 v2.0 154
AutoFact: Hydroxymethylglutaryl-CoA lyase, mitochondrial n=4 Tax=Arabidopsis RepID=HMGCL_ARATH 0.0
Blast2go: hydroxymethylglutaryl- lyase 0.0
unknown
biog2_v2.0_unigene14521 biogeco2 v2.0 614
AutoFact: ketose-bisphosphate aldolase class-II-like protein [Arabidopsis thaliana] gb|AAL60010.1| unknown protein [Arabidopsis thaliana] gb|AAM91809.1| unknown protein [Arabidopsis thaliana] gb|AEE29694.1| ketose-bisphosphate aldolase class-II-like protein [Arabid 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ketose-bisphosphate aldolase class-ii-like protein 0.0
Putative C-terminus
biog2_v2.0_unigene14603 biogeco2 v2.0 249
AutoFact: alpha-galactosidase [Helianthus annuus] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: alpha-galactosidase 0.0
Putative C-terminus
biog2_v2.0_unigene14914 biogeco2 v2.0 398
AutoFact: tRNA-dihydrouridine synthase 3-like n=3 Tax=Arabidopsis RepID=DUS3L_ARATH 0.0
FL-Next: sp=tRNA-dihydrouridine synthase 3-like; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: trna-dihydrouridine synthase 3-like protein 0.0
C-terminus
biog2_v2.0_unigene15069 biogeco2 v2.0 381
AutoFact: FO synthase [Azoarcus sp. EbN1] emb|CAI10697.1| hypothetical protein, similar to ThiH,4-methyl-5(beta-hydroxyethyl)thiazole phosphate synthesis [Aromatoleum aromaticum EbN1] 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: fo synthase 0.0
C-terminus
biog2_v2.0_unigene15307 biogeco2 v2.0 276
AutoFact: Dihydrodipicolinate synthase, putative n=1 Tax=Ricinus communis RepID=B9S6U4_RICCO 2.0e-16
Blast2go: dihydrodipicolinate synthase 3.72105e-37
unknown
biog2_v2.0_unigene15659 biogeco2 v2.0 478
AutoFact: protein helicase in vascular tissue and tapetum [Arabidopsis thaliana] gb|AEC08442.1| protein helicase in vascular tissue and tapetum [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable atp-dependent rna helicase ythdc2-like 0.0
Putative N-terminus
biog2_v2.0_unigene15718 biogeco2 v2.0 400
AutoFact: Copia-like retrotransposable element n=1 Tax=Arabidopsis thaliana RepID=Q9LH44_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: retrotransposon unclassified 0.0
Internal
biog2_v2.0_unigene15856 biogeco2 v2.0 360
AutoFact: glutamate synthase 1 [NADH] [Arabidopsis thaliana] ref|NP_001190529.1| glutamate synthase 1 [NADH] [Arabidopsis thaliana] ref|NP_001190530.1| glutamate synthase 1 [NADH] [Arabidopsis thaliana] sp|Q9LV03.2|GLUT1_ARATH RecName: Full=Glutamate synthase 1 [NA 0.0
FL-Next: sp=Glutamate synthase 1 [NADH], chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: glutamate synthase 1 0.0
Internal
biog2_v2.0_unigene16247 biogeco2 v2.0 411
AutoFact: tRNA-dihydrouridine synthase n=1 Tax=Ricinus communis RepID=B9SSD6_RICCO 0.0
FL-Next: sp=tRNA-dihydrouridine synthase 3-like; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: trna-dihydrouridine synthase 2 0.0
Internal
biog2_v2.0_unigene16294 biogeco2 v2.0 481
AutoFact: Melibiase family protein [Arabidopsis thaliana] gb|AEE77151.1| Melibiase family protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: alpha-galactosidase alpha-n- 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain