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Assembly Name: biogeco2 v2.0

Name: Aldolase-type TIM barrel

Term: IPR013785  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene5527 biogeco2 v2.0 1173
AutoFact: D-ribulose-5-phosphate-3-epimerase n=2 Tax=Arabidopsis RepID=Q9SAU2_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ribulose-phosphate 3- chloroplastic-like 0.0
Complete
biog2_v2.0_unigene5583 biogeco2 v2.0 1578
AutoFact: Fructose-bisphosphate aldolase n=3 Tax=Picea sitchensis RepID=A9NUH5_PICSI 0.0
FL-Next: sp=Fructose-bisphosphate aldolase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
biog2_v2.0_unigene5712 biogeco2 v2.0 383
AutoFact: Probable pyridoxal biosynthesis protein PDX1 n=2 Tax=Spermatophyta RepID=PDX1_GINBI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
biog2_v2.0_unigene7840 biogeco2 v2.0 234
AutoFact: [F] COG0167 Dihydroorotate dehydrogenase 0.0
Blast2go: dihydropyrimidine dehydrogenase 0.0
Coding
biog2_v2.0_unigene8336 biogeco2 v2.0 633
AutoFact: 12-oxophytodienoate reductase 7 n=3 Tax=BEP clade RepID=OPR7_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 12-oxophytodienoate reductase 3 0.0
Putative C-terminus
biog2_v2.0_unigene9136 biogeco2 v2.0 410
AutoFact: Dihydroorotate dehydrogenase (quinone), mitochondrial n=3 Tax=Arabidopsis RepID=PYRD_ARATH 3.0e-31
Blast2go: dihydroorotate dehydrogenase 6.24232e-35
unknown
biog2_v2.0_unigene9177 biogeco2 v2.0 347
AutoFact: 3-dehydroquinate dehydratase/shikimate 5-dehydrogenase (Fragment) n=1 Tax=Juglans regia RepID=A7XEE1_9ROSI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dehydroquinate dehydratase shikimate dehydrogenase 0.0
C-terminus
biog2_v2.0_unigene9400 biogeco2 v2.0 181
AutoFact: Osmotic stress-activated protein kinase n=1 Tax=Nicotiana tabacum RepID=Q8RXH5_TOBAC 0.0
Blast2go: serine threonine protein kinase 0.0
unknown
biog2_v2.0_unigene9762 biogeco2 v2.0 263
AutoFact: ferredoxin-dependent glutamate synthase [Glycine max] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ferredoxin-dependent glutamate synthase 0.0
Internal
biog2_v2.0_unigene9845 biogeco2 v2.0 358
AutoFact: tRNA-dihydrouridine synthase [Aedes aegypti] gb|EAT35713.1| tRNA-dihydrouridine synthase [Aedes aegypti] 6.0e-06
FL-Next: tr=FAD binding protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
Blast2go: fad binding protein 8.08507e-10
Internal
biog2_v2.0_unigene10023 biogeco2 v2.0 595
AutoFact: Glycerate oxidase n=1 Tax=Pinus pinaster RepID=F4MKM3_PINPS 0.0
FL-Next: tr=Glycerate oxidase; Pinus pinaster (Maritime pine). 0.0
Blast2go: aldolase-type tim barrel family protein 0.0
C-terminus
biog2_v2.0_unigene10284 biogeco2 v2.0 577
AutoFact: Glycerate oxidase n=1 Tax=Pinus pinaster RepID=F4MKM3_PINPS 0.0
FL-Next: tr=Glycerate oxidase; Pinus pinaster (Maritime pine). 0.0
Blast2go: aldolase-type tim barrel family protein 0.0
N-terminus
biog2_v2.0_unigene10313 biogeco2 v2.0 356
AutoFact: [F] COG0167 Dihydroorotate dehydrogenase 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dihydropyrimidine dehydrogenase 0.0
Internal
biog2_v2.0_unigene10316 biogeco2 v2.0 553
AutoFact: 12-oxophytodienoate reductase 2 [Arabidopsis thaliana] sp|Q8GYB8.2|OPR2_ARATH RecName: Full=12-oxophytodienoate reductase 2; AltName: Full=12-oxophytodienoate-10,11-reductase 2; Short=AtOPR2; Short=OPDA-reductase 2 gb|AAF04449.1|AC010718_18 12-oxophytodie 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 12-oxophytodienoate reductase 0.0
C-terminus
biog2_v2.0_unigene10339 biogeco2 v2.0 398
AutoFact: Melibiase family protein [Arabidopsis thaliana] gb|AEE77151.1| Melibiase family protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: alpha-galactosidase alpha-n- 0.0
Internal
biog2_v2.0_unigene10711 biogeco2 v2.0 471
AutoFact: glutamate synthase 1 [NADH] [Arabidopsis thaliana] ref|NP_001190529.1| glutamate synthase 1 [NADH] [Arabidopsis thaliana] ref|NP_001190530.1| glutamate synthase 1 [NADH] [Arabidopsis thaliana] sp|Q9LV03.2|GLUT1_ARATH RecName: Full=Glutamate synthase 1 [NA 0.0
FL-Next: sp=Glutamate synthase 1 [NADH], chloroplastic; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: glutamate synthase 1 0.0
Internal
biog2_v2.0_unigene11450 biogeco2 v2.0 270
AutoFact: Alpha-galactosidase/alpha-n-acetylgalactosaminidase, putative n=1 Tax=Ricinus communis RepID=B9SVM8_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: alpha-galactosidase alpha-n- 0.0
Internal
biog2_v2.0_unigene11528 biogeco2 v2.0 451
AutoFact: 2-isopropylmalate synthase 2, chloroplastic n=3 Tax=Arabidopsis RepID=LEU12_ARATH 0.0
FL-Next: sp=2-isopropylmalate synthase 2, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: 2-isopropylmalate synthase 0.0
C-terminus
biog2_v2.0_unigene11584 biogeco2 v2.0 365
AutoFact: Lipoyl synthase, mitochondrial n=1 Tax=Picea sitchensis RepID=LIAS_PICSI 0.0
FL-Next: sp=Lipoyl synthase, mitochondrial; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: lipoic acid synthase 0.0
C-terminus
biog2_v2.0_unigene12315 biogeco2 v2.0 296
AutoFact: Molybdopterin cofactor synthesis protein A, putative n=1 Tax=Ricinus communis RepID=B9SE98_RICCO 0.0
FL-Next: sp=Molybdopterin biosynthesis protein CNX3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: molybdopterin biosynthesis protein cnx3 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain