Sustainpine_db
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Assembly Name: biogeco2 v2.0

Name: Reverse transcriptase, RNA-dependent DNA polymerase

Term: IPR013103  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene18040 biogeco2 v2.0 188
AutoFact: Putative pol polyprotein n=1 Tax=Brassica oleracea var. botrytis RepID=A2T1U5_BRAOB 0.0
Blast2go: retrotransposon unclassified 0.0
unknown
biog2_v2.0_unigene18072 biogeco2 v2.0 596
AutoFact: Syntaxin, putative n=1 Tax=Ricinus communis RepID=B9RPA3_RICCO 0.0
FL-Next: tr=Syntaxin, putative; Ricinus communis (Castor bean). 0.0
Blast2go: qa- syp3 sed5p syntaxin 5-type 0.0
N-terminus
biog2_v2.0_unigene18080 biogeco2 v2.0 359
AutoFact: Putative retroelement pol polyprotein n=1 Tax=Arabidopsis thaliana RepID=Q9ZQE9_ARATH 3.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: copia-type polyprotein 1.22607e-37
Internal
biog2_v2.0_unigene18191 biogeco2 v2.0 392
AutoFact: DUF1336 domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: lipid binding 0.0
Internal
biog2_v2.0_unigene18330 biogeco2 v2.0 132
AutoFact: DUF3506 domain containing protein 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: executer1 chloroplast 0.0
C-terminus
biog2_v2.0_unigene18344 biogeco2 v2.0 478
AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q2QXM6_ORYSJ 0.0
Blast2go: retrotransposon unclassified 0.0
Putative coding
biog2_v2.0_unigene18426 biogeco2 v2.0 80
AutoFact: Asymmetric leaves 2 n=1 Tax=Carica papaya RepID=A7L4B2_CARPA 0.0
Blast2go: protein 0.0
unknown
biog2_v2.0_unigene18436 biogeco2 v2.0 511
AutoFact: beta-ketoacyl-ACP synthetase I-2 [Glycine max] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
biog2_v2.0_unigene18557 biogeco2 v2.0 362
AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q10NE5_ORYSJ 0.0
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: retrotransposon unclassified 0.0
Internal
biog2_v2.0_unigene18658 biogeco2 v2.0 651
AutoFact: Caffeoyl-CoA O-methyltransferase n=1 Tax=Chamaecyparis obtusa var. formosana RepID=A0S6W3_CHAOB 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: caffeoyl- o-methyltransferase 0.0
C-terminus
biog2_v2.0_unigene18736 biogeco2 v2.0 495
AutoFact: DUF659 domain containing protein 0.0
Blast2go: dna binding 0.0
Coding
biog2_v2.0_unigene18781 biogeco2 v2.0 413
AutoFact: Caffeoyl-CoA O-methyltransferase (Fragment) n=1 Tax=Plantago major RepID=Q2YHM9_PLAMJ 2.8026e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: caffeoyl 3-o-methyltransferase 0.0
Complete
biog2_v2.0_unigene18805 biogeco2 v2.0 655
AutoFact: DUF2045 domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein cw7 0.0
C-terminus
biog2_v2.0_unigene18873 biogeco2 v2.0 546
AutoFact: Sucrose synthase n=1 Tax=Pinus taeda RepID=A6N837_PINTA 0.0
FL-Next: tr=Sucrose synthase; Pinus taeda (Loblolly pine). 0.0
Blast2go: sucrose synthase 0.0
Internal
biog2_v2.0_unigene18874 biogeco2 v2.0 493
AutoFact: Flavonoid 3-monooxygenase n=3 Tax=Andropogoneae RepID=B6SSX8_MAIZE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cytochrome p450 0.0
C-terminus
biog2_v2.0_unigene18997 biogeco2 v2.0 680
AutoFact: Sucrose synthase n=1 Tax=Pinus taeda RepID=A6N837_PINTA 0.0
FL-Next: tr=Sucrose synthase; Pinus taeda (Loblolly pine). 0.0
Blast2go: sucrose synthase 0.0
N-terminus
biog2_v2.0_unigene19115 biogeco2 v2.0 367
AutoFact: S-adenosylmethionine decarboxylase proenzyme n=2 Tax=Picea sitchensis RepID=B8LQ15_PICSI 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: s-adenosylmethionine decarboxylase proenzyme 0.0
Putative Complete
biog2_v2.0_unigene19151 biogeco2 v2.0 456
AutoFact: Dimer_Tnp_hAT domain containing protein 2.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: hypothetical protein VITISV_000807 [Vitis vinifera] 2.40568e-19
Internal
biog2_v2.0_unigene19159 biogeco2 v2.0 436
AutoFact: DUF260 domain containing protein 2.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 1.4013e-45
N-terminus
biog2_v2.0_unigene19224 biogeco2 v2.0 176
AutoFact: Synaptotagmin, putative n=1 Tax=Ricinus communis RepID=B9T1N6_RICCO 0.0
Blast2go: plant synaptotagmin 0.0
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain