Sustainpine_db
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Assembly Name: biogeco2 v2.0

Name: Reverse transcriptase, RNA-dependent DNA polymerase

Term: IPR013103  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
biog2_v2.0_unigene14691 biogeco2 v2.0 327
• AutoFact: Gypsy/Ty-3 retroelement polyprotein; 69905-74404 n=1 Tax=Arabidopsis thaliana RepID=Q9LHM4_ARATH 0.0
• Blast2go: retrotransposon unclassified 0.0
unknown
biog2_v2.0_unigene14803 biogeco2 v2.0 303
• AutoFact: A/G-specific adenine glycosylase [Arabidopsis thaliana] gb|AEE83174.1| A/G-specific adenine glycosylase [Arabidopsis thaliana] 0.0
• Blast2go: a g-specific adenine dna glycosylase 0.0
Putative coding
biog2_v2.0_unigene15023 biogeco2 v2.0 221
• AutoFact: asymmetric leaves 2 [Carica papaya] 0.0
• Blast2go: lob domain-containing protein 6 0.0
unknown
biog2_v2.0_unigene15086 biogeco2 v2.0 366
• AutoFact: Reverse transcriptase n=1 Tax=Picea glauca RepID=Q9M5J7_PICGL 0.0
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Blast2go: gag-pol polyprotein 0.0
Internal
biog2_v2.0_unigene15161 biogeco2 v2.0 246
• AutoFact: Retrotransposon protein, putative, Ty1-copia subclass n=1 Tax=Oryza sativa Japonica Group RepID=Q2QP36_ORYSJ 1.0e-28
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Blast2go: reverse transcriptase 1.43514e-35
Internal
biog2_v2.0_unigene15186 biogeco2 v2.0 277
• AutoFact: Nucleotide binding protein, putative n=1 Tax=Ricinus communis RepID=B9SED3_RICCO 0.0
• FL-Next: sp=Tryptophan aminotransferase-related protein 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: tryptophan aminotransferase-related protein 4-like 0.0
Internal
biog2_v2.0_unigene15196 biogeco2 v2.0 321
• AutoFact: Cinnamoyl-CoA reductase n=2 Tax=Malvoideae RepID=D9ZKR8_9ROSI 0.0
• FL-Next: tr=Cinnamoyl-CoA reductase; Pinus massoniana. 0.0
• Blast2go: cinnamoyl reductase 0.0
Putative C-terminus
biog2_v2.0_unigene15282 biogeco2 v2.0 436
• AutoFact: hydrolase, alpha/beta fold family protein [Arabidopsis thaliana] gb|AAK32768.1|AF361600_1 AT5g02970/F9G14_280 [Arabidopsis thaliana] emb|CAB86051.1| putative protein [Arabidopsis thaliana] gb|AAP21157.1| At5g02970/F9G14_280 [Arabidopsis thaliana] gb|AED90 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: alpha beta fold family protein 0.0
Internal
biog2_v2.0_unigene15443 biogeco2 v2.0 214
• AutoFact: PREDICTED: similar to Bifunctional dihydrofolate reductase-thymidylate synthase n=1 Tax=Vitis vinifera RepID=UPI0001982DBD 0.0
• Blast2go: dihydrofolate reductase-thymidylate synthase 0.0
unknown
biog2_v2.0_unigene15501 biogeco2 v2.0 473
• AutoFact: beta-ketoacyl-ACP synthetase I-2 [Glycine max] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Internal
biog2_v2.0_unigene15541 biogeco2 v2.0 244
• AutoFact: DNA replication licensing factor MCM3 homolog 1 n=9 Tax=Poaceae RepID=MCM31_MAIZE 0.0
• FL-Next: sp=DNA replication licensing factor MCM3 homolog 3; Zea mays (Maize). 0.0
• Blast2go: dna replication licensing factor mcm3 homolog 1-like 0.0
Internal
biog2_v2.0_unigene15585 biogeco2 v2.0 238
• AutoFact: CemA-like proton extrusion protein-like protein [Arabidopsis thaliana] gb|AAL85996.1| unknown protein [Arabidopsis thaliana] gb|AAP04130.1| unknown protein [Arabidopsis thaliana] dbj|BAD43184.1| unknown protein [Arabidopsis thaliana] dbj|BAD43308.1| unkno 0.0
• FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
• Blast2go: protein 0.0
Internal
biog2_v2.0_unigene15592 biogeco2 v2.0 439
• AutoFact: putative subtilisin serine protease [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: subtilisin-like protease-like 0.0
Putative N-terminus
biog2_v2.0_unigene15679 biogeco2 v2.0 324
• AutoFact: serine protease-like protein [Nicotiana tabacum] 0.0
• FL-Next: tr=Subtilisin-like protein; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Blast2go: subtilisin-like protease-like 0.0
C-terminus
biog2_v2.0_unigene15695 biogeco2 v2.0 391
• AutoFact: Multidrug resistance pump, putative n=1 Tax=Ricinus communis RepID=B9R7N6_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein transparent testa 12-like 0.0
Internal
biog2_v2.0_unigene15718 biogeco2 v2.0 400
• AutoFact: Copia-like retrotransposable element n=1 Tax=Arabidopsis thaliana RepID=Q9LH44_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: retrotransposon unclassified 0.0
Internal
biog2_v2.0_unigene15755 biogeco2 v2.0 597
• AutoFact: TRAPPC10 domain containing protein 2.0e-27
• FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
• Blast2go: protein club 0.0
Complete
biog2_v2.0_unigene15848 biogeco2 v2.0 151
• AutoFact: Putative transposase n=1 Tax=Arabidopsis thaliana RepID=O81190_ARATH 2.0e-21
• Blast2go: hat family dimerisation domain containing protein 1.69322e-26
unknown
biog2_v2.0_unigene15967 biogeco2 v2.0 458
• AutoFact: Multidrug resistance-associated protein MRP1 (Fragment) n=1 Tax=Triticum aestivum RepID=Q8LGN7_WHEAT 4.00001e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: abc transporter c family member 5-like 0.0
Putative C-terminus
biog2_v2.0_unigene16010 biogeco2 v2.0 318
• AutoFact: A/G-specific adenine glycosylase [Arabidopsis thaliana] gb|AEE83174.1| A/G-specific adenine glycosylase [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: a g-specific adenine dna glycosylase 0.0
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain