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Assembly Name: biogeco2 v2.0

Name: Zinc finger, C2H2

Term: IPR007087  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene18 biogeco2 v2.0 634
AutoFact: HD2 type histone deacetylase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RGA1_PHYPA 4.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: hd2 type histone deacetylase 0.0
C-terminus
biog2_v2.0_unigene267 biogeco2 v2.0 467
AutoFact: D8-sphingolipid desaturase n=1 Tax=Jatropha curcas RepID=A4UIY7_9ROSI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: delta-8 sphingolipid desaturase 0.0
Putative C-terminus
biog2_v2.0_unigene367 biogeco2 v2.0 359
AutoFact: Ubiquitin-protein ligase, putative n=1 Tax=Ricinus communis RepID=B9SIX2_RICCO 0.0
Blast2go: e3 ubiquitin-protein ligase ubr4 0.0
unknown
biog2_v2.0_unigene462 biogeco2 v2.0 703
AutoFact: protein kinase family protein [Arabidopsis thaliana] gb|AEE79818.1| protein kinase family protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: serine threonine-protein kinase 0.0
Internal
biog2_v2.0_unigene542 biogeco2 v2.0 1204
AutoFact: ovule receptor-like kinase 28 [Solanum chacoense] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein strubbelig-receptor family 8-like 0.0
N-terminus
biog2_v2.0_unigene640 biogeco2 v2.0 621
AutoFact: DUF1644 domain containing protein 6.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein 0.0
Internal
biog2_v2.0_unigene766 biogeco2 v2.0 456
AutoFact: Receptor serine-threonine protein kinase, putative n=1 Tax=Ricinus communis RepID=B9RT11_RICCO 0.0
FL-Next: tr=Receptor serine-threonine protein kinase, putative; Ricinus communis (Castor bean). 0.0
Blast2go: protein kinase family protein 0.0
C-terminus
biog2_v2.0_unigene819 biogeco2 v2.0 701
AutoFact: protein arginine N-methyltransferase 3 [Arabidopsis thaliana] sp|Q0WVD6.1|ANM3_ARATH RecName: Full=Probable protein arginine N-methyltransferase 3 dbj|BAE98912.1| hypothetical protein [Arabidopsis thaliana] gb|AEE75178.1| protein arginine N-methyltransfer 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable protein arginine n-methyltransferase 3-like 0.0
C-terminus
biog2_v2.0_unigene958 biogeco2 v2.0 540
AutoFact: ubiquitin-protein ligase RNF14 [Arabidopsis thaliana] gb|AAF81330.1|AC007767_10 Contains similarity to ring finger protein 14 from Homo sapiens gb|NM_004290. It contains an IBR domain PF|01485 [Arabidopsis thaliana] gb|AAG60174.1|AC084110_7 hypothetical p 0.0
FL-Next: tr=OSIGBa0142I02-OSIGBa0101B20.23 protein; Oryza sativa (Rice). 0.0
Blast2go: ring finger 0.0
C-terminus
biog2_v2.0_unigene975 biogeco2 v2.0 577
AutoFact: Potassium transporter HAK2p n=1 Tax=Mesembryanthemum crystallinum RepID=Q94KC6_MESCR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: potassium transporter 2 0.0
Internal
biog2_v2.0_unigene1030 biogeco2 v2.0 1141
AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9R8B0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc finger 0.0
Putative C-terminus
biog2_v2.0_unigene1038 biogeco2 v2.0 788
AutoFact: E3 ubiquitin-protein ligase PRT1 [Arabidopsis thaliana] sp|Q8LBL5.2|PRT1_ARATH RecName: Full=E3 ubiquitin-protein ligase PRT1; AltName: Full=Proteolysis 1 protein emb|CAA11891.1| PRT1 [Arabidopsis thaliana] emb|CAA11892.1| PRT1 [Arabidopsis thaliana] dbj| 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: e3 ubiquitin-protein ligase prt1 0.0
Putative Complete
biog2_v2.0_unigene1136 biogeco2 v2.0 1095
AutoFact: ABI3-interacting protein 3 n=1 Tax=Callitropsis nootkatensis RepID=Q84NF5_9CONI 0.0
FL-Next: tr=ABI3-interacting protein 3; Callitropsis nootkatensis. 0.0
Blast2go: abi3-interacting protein 3 0.0
C-terminus
biog2_v2.0_unigene1258 biogeco2 v2.0 1448
AutoFact: Serine/threonine-protein kinase n=1 Tax=Cucumis melo subsp. melo RepID=E5GB79_CUCME 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: serine threonine-protein kinase 0.0
Putative C-terminus
biog2_v2.0_unigene1262 biogeco2 v2.0 324
AutoFact: MIP-T3 multi-domain protein 8.0e-16
Blast2go: f-box-like wd repeat-containing protein tbl1xr1-like 0.0
unknown
biog2_v2.0_unigene1306 biogeco2 v2.0 256
AutoFact: DUF659 domain containing protein 0.0
Blast2go: uncharacterized protein loc100852591 0.0
Putative coding
biog2_v2.0_unigene1350 biogeco2 v2.0 458
AutoFact: Altered response to gravity (Arg1), plant, putative n=1 Tax=Ricinus communis RepID=B9S2J6_RICCO 0.0
Blast2go: altered response to gravity 0.0
unknown
biog2_v2.0_unigene1367 biogeco2 v2.0 722
AutoFact: DUF3406 multi-domain protein 0.0
FL-Next: sp=Translocase of chloroplast 132, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
C-terminus
biog2_v2.0_unigene1553 biogeco2 v2.0 573
AutoFact: DUF1421 multi-domain protein 9.0e-18
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: zinc finger protein 0.0
C-terminus
biog2_v2.0_unigene1621 biogeco2 v2.0 1124
AutoFact: D8-sphingolipid desaturase n=1 Tax=Jatropha curcas RepID=A4UIY7_9ROSI 0.0
FL-Next: tr=D8-sphingolipid desaturase; Jatropha curcas. 0.0
Blast2go: fatty acid 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain