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Assembly Name: biogeco2 v2.0

Name: Zinc finger, CCHC-type

Term: IPR001878  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene8733 biogeco2 v2.0 326
AutoFact: DUF659 multi-domain protein 0.0
FL-Next: tr=DNA binding protein; Cucumis melo subsp. melo. 0.0
Blast2go: uncharacterized protein loc100247282 0.0
Putative N-terminus
biog2_v2.0_unigene8734 biogeco2 v2.0 355
AutoFact: Unassigned protein
Blast2go: uncharacterized protein 0.0
unknown
biog2_v2.0_unigene8944 biogeco2 v2.0 448
AutoFact: digalactosyldiacylglycerol synthase 1 [Vigna unguiculata] 0.0
FL-Next: sp=Digalactosyldiacylglycerol synthase 1, chloroplastic; Glycine max (Soybean) (Glycine hispida). 0.0
Blast2go: digalactosyldiacylglycerol synthase 1 0.0
C-terminus
biog2_v2.0_unigene8975 biogeco2 v2.0 309
AutoFact: Copia-type polyprotein n=1 Tax=Glycine max RepID=C0JJI2_SOYBN 4.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gag-pol polyprotein 6.18972e-24
Internal
biog2_v2.0_unigene9068 biogeco2 v2.0 537
AutoFact: Copia-type polyprotein, putative n=1 Tax=Arabidopsis thaliana RepID=Q9C536_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
biog2_v2.0_unigene9097 biogeco2 v2.0 419
AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9SE49_RICCO 0.0
FL-Next: sp=tRNA dimethylallyltransferase 9; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: trna dimethylallyltransferase 9 0.0
C-terminus
biog2_v2.0_unigene9109 biogeco2 v2.0 433
AutoFact: DEAD-box ATP-dependent RNA helicase 3 [Arabidopsis thaliana] gb|AAM26693.1| At5g26743 [Arabidopsis thaliana] gb|AAO42779.1| At5g26743 [Arabidopsis thaliana] gb|AED93564.1| DEAD-box ATP-dependent RNA helicase 3 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dead-box atp-dependent rna helicase chloroplastic-like 0.0
Internal
biog2_v2.0_unigene9160 biogeco2 v2.0 345
AutoFact: putative protein kinase [Oryza sativa Japonica Group] gb|EEE59981.1| hypothetical protein OsJ_12694 [Oryza sativa Japonica Group] 8.99998e-41
Blast2go: map protein kinase 0.0
unknown
biog2_v2.0_unigene9221 biogeco2 v2.0 560
AutoFact: TFIIF_alpha multi-domain protein 9.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cax-interacting protein 4 0.0
C-terminus
biog2_v2.0_unigene9301 biogeco2 v2.0 364
AutoFact: RecName: Full=DEAD-box ATP-dependent RNA helicase 9 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dead-box atp-dependent rna helicase 53-like 0.0
Internal
biog2_v2.0_unigene9314 biogeco2 v2.0 634
AutoFact: MYB transcription factor MYB93 n=2 Tax=Glycine max RepID=Q0PJJ8_SOYBN 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: myb family transcription factor 0.0
C-terminus
biog2_v2.0_unigene9458 biogeco2 v2.0 366
AutoFact: Pleckstrin homology (PH) domain-containing protein [Arabidopsis thaliana] gb|AAL50066.1| At2g30880/F7F1.9 [Arabidopsis thaliana] gb|AAN28904.1| At2g30880/F7F1.9 [Arabidopsis thaliana] gb|AEC08451.1| Pleckstrin homology (PH) domain-containing protein [Arab 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: ph domain containing protein 0.0
Internal
biog2_v2.0_unigene9539 biogeco2 v2.0 411
AutoFact: MYB transcription factor [Hevea brasiliensis] 0.0
Blast2go: dna binding 0.0
unknown
biog2_v2.0_unigene9551 biogeco2 v2.0 239
AutoFact: putative Peptidyl Prolyl cis-trans isomerase [Oryza sativa Japonica Group] 4.0e-24
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: fk506-binding protein 0.0
Putative N-terminus
biog2_v2.0_unigene9621 biogeco2 v2.0 138
AutoFact: RecName: Full=DEAD-box ATP-dependent RNA helicase 9 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dead-box atp-dependent rna helicase 53-like 0.0
Internal
biog2_v2.0_unigene9630 biogeco2 v2.0 443
AutoFact: myb family transcription factor [Brassica oleracea] 0.0
Blast2go: protein 0.0
unknown
biog2_v2.0_unigene9755 biogeco2 v2.0 497
AutoFact: CCAAT-binding transcription factor [Medicago truncatula] 6.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nuclear transcription factor y subunit a-1 0.0
Internal
biog2_v2.0_unigene9770 biogeco2 v2.0 473
AutoFact: Triacylglycerol lipase n=2 Tax=Arabidopsis thaliana RepID=F4JT30_ARATH 0.0
FL-Next: tr=Predicted protein; Hordeum vulgare var. distichum (Two-rowed barley). 0.0
Blast2go: protein 0.0
Internal
biog2_v2.0_unigene9802 biogeco2 v2.0 359
AutoFact: putative protein kinase; 29119-30743 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
biog2_v2.0_unigene9812 biogeco2 v2.0 585
AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q2QXM6_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: retrotransposon unclassified 0.0
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain