Sustainpine_db
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Assembly Name: SustainPine v1.2

Name: ARID/BRIGHT DNA-binding domain

Term: IPR001606  Help

Source: InterPro from Blast2go


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v1.2_unigene104 SustainPine v1.2 1463
AutoFact: ARID/BRIGHT DNA-binding domain-containing protein/ELM2 domain-containing protein/Myb-like DNA-binding domain-containing protein n=2 Tax=Arabidopsis thaliana RepID=Q1PEA0_ARATH 4.0e-07
FL-Next: tr=ARID/BRIGHT DNA-binding , ELM2 domain and myb-like DNA-binding domain-containing protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: arid bright dna-binding elm2 domain and myb-like dna-binding domain-containing protein 3.15213e-07
N-terminus
sp_v1.2_unigene3955 SustainPine v1.2 997
AutoFact: ARID/BRIGHT DNA-binding domain-containing protein (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9S710_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Blast2go: arid bright dna-binding domain-containing protein 0.0
C-terminus
sp_v1.2_unigene9970 SustainPine v1.2 1093
AutoFact: ARID/BRIGHT DNA-binding domain-containing protein n=1 Tax=Arabidopsis lyrata subsp. lyrata RepID=D7L9D8_ARALL 9.99995e-41
FL-Next: tr=ARID/BRIGHT DNA-binding domain-containing protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
Blast2go: arid bright dna-binding domain-containing protein 2.43941e-40
Internal
sp_v1.2_unigene13788 SustainPine v1.2 2169
AutoFact: high mobility group-box and ARID domain-binding domain-containing protein [Arabidopsis thaliana] sp|Q9MAT6.1|HMG15_ARATH RecName: Full=High mobility group B protein 15; AltName: Full=Nucleosome/chromatin assembly factor group D 15 gb|AAF40449.1|AC004809_7 3.00004e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: high mobility group family protein 0.0
Complete
sp_v1.2_unigene23791 SustainPine v1.2 1340
AutoFact: high mobility group-box and ARID domain-binding domain-containing protein [Arabidopsis thaliana] sp|Q9MAT6.1|HMG15_ARATH RecName: Full=High mobility group B protein 15; AltName: Full=Nucleosome/chromatin assembly factor group D 15 gb|AAF40449.1|AC004809_7 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: high mobility group family 0.0
N-terminus
sp_v1.2_unigene25869 SustainPine v1.2 927
AutoFact: glutathione S-transferase GST 16 - like protein [Oryza sativa Japonica Group] gb|EAZ09947.1| hypothetical protein OsI_32246 [Oryza sativa Indica Group] gb|EAZ45544.1| hypothetical protein OsJ_30204 [Oryza sativa Japonica Group] 2.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: high mobility group family 2.16409e-39
N-terminus
sp_v1.2_unigene32974 SustainPine v1.2 983
AutoFact: ARID/BRIGHT DNA-binding domain-containing protein (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9S710_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Blast2go: hypothetical protein SELMODRAFT_449331 0.0
Internal
sp_v1.2_unigene39421 SustainPine v1.2 621
AutoFact: ARID domain containing protein 6.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: predicted protein 1.03198e-17
Putative N-terminus
sp_v1.2_unigene51899 SustainPine v1.2 415
AutoFact: Jumonji domain protein (Fragment) n=1 Tax=Populus trichocarpa RepID=B9GWH9_POPTR 2.94273e-44
FL-Next: Isoform 2 of Probable lysine-specific demethylase JMJ14 OS=Arabidopsis thaliana GN=JMJ14 0.0
Blast2go: phd transcription factor 0.0
Putative N-terminus
sp_v1.2_unigene59313 SustainPine v1.2 393
AutoFact: ARID/BRIGHT DNA-binding domain-containing protein/ELM2 domain-containing protein/Myb-like DNA-binding domain-containing protein n=2 Tax=Arabidopsis thaliana RepID=Q1PEA0_ARATH 4.0e-06
FL-Next: tr=ARID/BRIGHT DNA-binding , ELM2 domain and myb-like DNA-binding domain-containing protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: arid bright dna-binding elm2 domain and myb-like dna-binding domain-containing protein 6.95887e-07
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain