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Assembly Name: Hypothalamus m-f1 v1.0

Listing Annotated UniGenes

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Help Complete | Putative Complete | N-terminus | Putative N-terminus | Internal | C-terminus | Putative C-terminus | Coding | Putative Coding | Putative ncRNA | Misassembled | Unknown


Search: Containing in

Name Length
SoftwareDescriptionE-value
FL-next Status Origin of reads
hpt_m_f1_v1.0_unigene1 768
• AutoFact
similar to eukaryotic translation initiation factor; K03253 translation initiation factor eIF-3 subunit 9
0.0
• FL-Next
tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
Si:dkey-26i13.2
4.218e-10
C-terminus
hpt_m_f1_v1.0_unigene2 754
• AutoFact
nadh dehydrogenase flavoprotein 1, mitochondrial n=8 Tax=Euteleostomi RepID=B5X2F6_SALSA
0.0
• FL-Next
tr=nadh dehydrogenase flavoprotein 1, mitochondrial; Salmo salar (Atlantic salmon).
0.0
• Sma3
nadh dehydrogenase flavoprotein 1, mitochondrial
3.489e-10
Internal
hpt_m_f1_v1.0_unigene3 720
• AutoFact
gprc5c, zgc:171736; G protein-coupled receptor, family C, group 5, member C; K04620 G protein-coupled receptor family C group 5 member C
0.0
• FL-Next
tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
None-
Putative C-terminus
hpt_m_f1_v1.0_unigene5 713
• AutoFact
U4/U6 small nuclear ribonucleoprotein prp31 n=5 Tax=Clupeocephala RepID=prp31_DANRE
0.0
• FL-Next
sp=U4/U6 small nuclear ribonucleoprotein prp31; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
U4/U6 small nuclear ribonucleoprotein prp31
4.09e-15
Putative C-terminus
hpt_m_f1_v1.0_unigene6 550
• AutoFact
dual specificity phosphatase 5 n=2 Tax=Danio rerio RepID=Q6PBT4_DANRE
0.0
• FL-Next
sp=dual specificity protein phosphatase; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
dual specificity protein phosphatase
0.0
C-terminus
hpt_m_f1_v1.0_unigene8 886
• AutoFact
c1orf74 homolog n=1 Tax=Anoplopoma fimbria RepID=C3KJ37_ANOFI
0.0
• FL-Next
tr=c1orf74 homolog; Anoplopoma fimbria (Sablefish).
0.0
• Sma3
UPF0739 protein c1orf74 homolog
1.903e-11
N-terminus
hpt_m_f1_v1.0_unigene9 576
• AutoFact
zgc:153347; K11666 ino80 complex subunit B
0.0
• FL-Next
tr=Zinc finger HIT domain-containing protein 4; Salmo salar (Atlantic salmon).
0.0
• Sma3
ino80 complex subunit B
4.138e-11
C-terminus
hpt_m_f1_v1.0_unigene10 571
• AutoFact
keratin 18 (Fragment) n=1 Tax=Epinephelus coioides RepID=B3GPH2_EPICO
0.0
• FL-Next
tr=Chromosome undetermined SCAF14505, whole genome shotgun sequence; Tetraodon nigroviridis (Green puffer).
0.0
• Sma3
keratin, type I cytoskeletal 18
4.128e-28
Internal
hpt_m_f1_v1.0_unigene11 492
• AutoFact
COP9 signalosome complex subunit 3 n=29 Tax=Euteleostomi RepID=CSN3_HUMAN
0.0
• FL-Next
tr=COP9 signalosome complex subunit 3; Salmo salar (Atlantic salmon).
0.0
• Sma3
Photomorphogenic subunit 3-like protein
3.255e-06
Internal
hpt_m_f1_v1.0_unigene12 540
• AutoFact
MGC55344; zgc:55344
0.0
• FL-Next
sp=Vacuolar fusion protein ccz1 homolog; Tetraodon nigroviridis (Green puffer).
0.0
• Sma3
Vacuolar fusion protein ccz1 homolog
4.787e-20
Internal
hpt_m_f1_v1.0_unigene13 469
• AutoFact
elongation factor 1-gamma (Fragment) n=1 Tax=Perca flavescens RepID=F1C753_PERFV
0.0
• FL-Next
tr=elongation factor 1-gamma; Salmo salar (Atlantic salmon).
0.0
• Sma3
Eukaryotic translation elongation factor 1 gamma
2.044e-34
Internal
hpt_m_f1_v1.0_unigene14 727
• AutoFact
peptidyl-prolyl cis-trans isomerase-like 2 n=1 Tax=Salmo salar RepID=C0HBF0_SALSA
0.0
• FL-Next
tr=peptidyl-prolyl cis-trans isomerase-like 2; Salmo salar (Atlantic salmon).
0.0
• Sma3
peptidyl-prolyl cis-trans isomerase
0.0
Internal
hpt_m_f1_v1.0_unigene15 541
• AutoFact
Novel protein (Zgc:92854) n=6 Tax=Clupeocephala RepID=Q6DGM5_DANRE
0.0
• FL-Next
tr=Noelin; Osmerus mordax (Rainbow smelt) (Atherina mordax).
0.0
• Sma3
Noelin
0.0
Complete
hpt_m_f1_v1.0_unigene19 365
• AutoFact
Ribosomal protein s30 n=5 Tax=Percomorpha RepID=A2Q0U7_SOLSE
0.0
• FL-Next
tr=Ribosomal protein s30; Solea senegalensis (Senegalese sole).
0.0
• Sma3
Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (Fox derived)
2.777e-10
N-terminus
hpt_m_f1_v1.0_unigene20 840
• AutoFact
TANC1; tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1
2.0e-05
• FL-Next
tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
None-
Internal
hpt_m_f1_v1.0_unigene22 372
• AutoFact
Unassigned protein
0.0
• FL-Next
None-
• Sma3
None-
putative_coding
hpt_m_f1_v1.0_unigene23 534
• AutoFact
TAT-binding protein 1 (Fragment) n=2 Tax=Euteleostomi RepID=Q9DFE8_ONCMY
0.0
• FL-Next
tr=Proteasome 26s subunit ATPase 3; Oryzias latipes (Medaka fish) (Japanese ricefish).
0.0
• Sma3
26s protease regulatory subunit 8
3.925e-12
N-terminus
hpt_m_f1_v1.0_unigene25 517
• AutoFact
sqrdl, MGC64260, cg14997; sulfide quinone reductase-like; K00540 [EC:1.-.-.-]
1.0e-26
• FL-Next
tr=sulfide quinone reductase-like (yeast); Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
sulfide quinone reductase-like (yeast)
5.195e-11
C-terminus
hpt_m_f1_v1.0_unigene26 419
• AutoFact
mitochondrial 39s ribosomal protein L3 n=1 Tax=Osmerus mordax RepID=C1BIR4_OSMMO
0.0
• FL-Next
tr=mitochondrial 39s ribosomal protein L3; Osmerus mordax (Rainbow smelt) (Atherina mordax).
0.0
• Sma3
mitochondrial ribosomal protein L3
1.868e-18
Internal
hpt_m_f1_v1.0_unigene29 581
• AutoFact
dnajB12; dnaj (hsp40) homolog, subfamily B, member 12; K09518 dnaj homolog subfamily B member 12
0.0
• FL-Next
tr=dnaj (hsp40) homolog, subfamily B, member 12; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
dnaj (hsp40) homolog, subfamily B, member 12
1.071e-13
C-terminus


Juntadeandalucia

IFAPA Centro El Toruño. Ctra. N. IV Km. 654a. Camino de Tiro Pichón. El Puerto de Santa María (Cádiz), Spain.
Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29590 Campanillas (Málaga), Spain