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Assembly Name: Hypothalamus m-f1 v1.0
General Information
Organism: Solea senegalensis
Tissue: Hypothalamus
Description: Hypothalamus male f1
Assembly Statistics
Number of unigenes: 19491
Mean contig length: 262
SNPs statistics
Tot. SNPs: 17772
Unigenes with SNPs: 6282
Mean SNPs per unigene: 2.8
SSRs statistics
Tot. SSRs: 3213
Mean SSRs per unigene: 2.2
SSRs di-nucl. : 1221
SSRs tri-nucl. : 1257
SSRs > tri-nucl. : 735
Annotations statistics
Annotated unigenes: 6608
Descriptions: 12352
Gos: 1806
Interpros: 4617
ECs: 433
Keggs: 133
Project components

Assembly components:

Unigenes file: hpt_m_f1_v1.0_unigenes.fasta

ACE file: hpt_m_f1_v1.0.ace



Download annotations for specified unigenes:

Paste your unigenes names list (one unigene per line):
Maximum 10 000 names


Or upload unigenes file with names list (one unigene per line):


SFFs:
File 1: HD90K6R01.sff

File 2: HD90K6R02.sff


SeqTrimNext reports:

File 1: HD90K6R01_report.pdf

File 2: HD90K6R02_report.pdf





Juntadeandalucia

IFAPA Centro El Toruño. Ctra. N. IV Km. 654a. Camino de Tiro Pichón. El Puerto de Santa María (Cádiz), Spain.
Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29590 Campanillas (Málaga), Spain