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Assembly Name: Hypothalamus m-f1 v1.0

Listing Annotated UniGenes

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Help Complete | Putative Complete | N-terminus | Putative N-terminus | Internal | C-terminus | Putative C-terminus | Coding | Putative Coding | Putative ncRNA | Misassembled | Unknown


Search: Containing in

Name Length
SoftwareDescriptionE-value
FL-next Status Origin of reads
hpt_m_f1_v1.0_unigene309 338
• AutoFact
None-
• FL-Next
None-
• Sma3
Chromosome 1 SCAF15138, whole genome shotgun sequence.
9.301e-07
putative_coding
hpt_m_f1_v1.0_unigene310 349
• AutoFact
calcyclin-binding protein n=1 Tax=Osmerus mordax RepID=C1BIK0_OSMMO
9.94922e-44
• FL-Next
tr=calcyclin-binding protein; Osmerus mordax (Rainbow smelt) (Atherina mordax).
0.0
• Sma3
calcyclin-binding protein
4.46e-18
C-terminus
hpt_m_f1_v1.0_unigene312 366
• AutoFact
Tmc6-related protein 1 (Fragment) n=2 Tax=Takifugu rubripes RepID=Q7T1U0_TAKRU
4.0e-18
• FL-Next
tr=Zgc:92610; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
Zgc:92610
6.045e-06
C-terminus
hpt_m_f1_v1.0_unigene315 505
• AutoFact
hect domain and rld 4-like; K10615 E3 ubiquitin-protein ligase HERC4 [EC:6.3.2.19]
0.0
• FL-Next
tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
Novel protein similar to vertebrate hect domain and rld 3 (HERC3)
4.891e-09
C-terminus
hpt_m_f1_v1.0_unigene316 910
• AutoFact
PREDICTED: t-complex 11 (mouse)-like 1 n=2 Tax=Taeniopygia guttata RepID=UPI000194C692
0.0
• FL-Next
tr=Novel protein (Zgc:113267); Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
TCP11
2.146e-10
Internal
hpt_m_f1_v1.0_unigene318 394
• AutoFact
claudin 5a n=2 Tax=Euteleostei RepID=B1H3M7_SALSA
2.0e-08
• FL-Next
tr=claudin 5a; Takifugu rubripes (Japanese pufferfish) (Fugu rubripes).
0.0
• Sma3
claudin 5a
5.093e-15
Putative N-terminus
hpt_m_f1_v1.0_unigene319 424
• AutoFact
Tetraspanin-8 n=1 Tax=Anoplopoma fimbria RepID=C3KJ82_ANOFI
1.0e-05
• FL-Next
tr=Tetraspanin-8; Anoplopoma fimbria (Sablefish).
0.0
• Sma3
None-
Putative C-terminus
hpt_m_f1_v1.0_unigene329 322
• AutoFact
similar to GULP, engulfment adaptor ptb domain containing 1
1.0e-16
• FL-Next
tr=ptb domain-containing engulfment adapter protein 1; Anoplopoma fimbria (Sablefish).
0.0
• Sma3
ptb domain-containing engulfment adapter protein 1
3.171e-15
C-terminus
hpt_m_f1_v1.0_unigene332 754
• AutoFact
pfkma, pfkm, zgc:92344; phosphofructokinase, muscle a (EC:2.7.1.11); K00850 6-phosphofructokinase [EC:2.7.1.11]
0.0
• FL-Next
tr=Phosphofructokinase, muscle a; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
Phosphohexokinase
0.0
Internal
hpt_m_f1_v1.0_unigene336 359
• AutoFact
neurexin 3a alpha n=3 Tax=Danio rerio RepID=A1XQX8_DANRE
2.0e-28
• FL-Next
tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
neurexin-1-alpha
4.371e-09
Internal
hpt_m_f1_v1.0_unigene339 430
• AutoFact
abcc2, MGC66072, zgc:66072; ATP-binding cassette, sub-family C (CFTR/MRP), member 2; K05666 ATP-binding cassette, subfamily C (CFTR/MRP), member 2
7.0e-30
• FL-Next
tr=Multidrug resistance associated protein 2; Oncorhynchus mykiss (Rainbow trout) (Salmo gairdneri).
0.0
• Sma3
Multidrug resistance-associated protein member 2
9.921e-06
Internal
hpt_m_f1_v1.0_unigene340 440
• AutoFact
gcshb, wu:fd56h06, zgc:110557, zgc:92732; glycine cleavage system protein H (aminomethyl carrier), b
4.0e-33
• FL-Next
tr=glycine cleavage system H protein, mitochondrial; Osmerus mordax (Rainbow smelt) (Atherina mordax).
0.0
• Sma3
glycine cleavage system H protein, mitochondrial
0.0
N-terminus
hpt_m_f1_v1.0_unigene342 667
• AutoFact
nipblb, nipbl, wu:fi33d08; nipped-b homolog b (Drosophila); K06672 cohesin loading factor subunit scc2
9.80909e-45
• FL-Next
tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
scc2-2B
9.146e-06
Internal
hpt_m_f1_v1.0_unigene343 241
• AutoFact
Unassigned protein
0.0
• FL-Next
tr=Novel protein similar to vertebrate alpha-2-HS-glycoprotein (AHSG); Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
Si:ch73-252g14.4
2.79e-06
Internal
hpt_m_f1_v1.0_unigene348 266
• AutoFact
PREDICTED: transmembrane protein 129-like n=1 Tax=Monodelphis domestica RepID=UPI00005E8C7F
2.0e-26
• FL-Next
tr=transmembrane protein 129; Salmo salar (Atlantic salmon).
0.0
• Sma3
transmembrane protein 129
5.861e-25
Internal
hpt_m_f1_v1.0_unigene350 457
• AutoFact
eukaryotic translation elongation factor 1 epsilon-1 n=1 Tax=Dicentrarchus labrax RepID=E6ZID9_DICLA
5.0e-23
• FL-Next
tr=eukaryotic translation elongation factor 1 epsilon-1; Dicentrarchus labrax (European seabass) (Morone labrax).
0.0
• Sma3
eukaryotic translation elongation factor 1 epsilon-1
1.063e-10
C-terminus
hpt_m_f1_v1.0_unigene351 406
• AutoFact
NEDD4-like E3 ubiquitin-protein ligase wwp2 n=2 Tax=Salmo salar RepID=C0H9T3_SALSA
0.0
• FL-Next
tr=NEDD4-like E3 ubiquitin-protein ligase wwp2; Salmo salar (Atlantic salmon).
0.0
• Sma3
SMAD-specific E3 ubiquitin-protein ligase 2
1.379e-08
Internal
hpt_m_f1_v1.0_unigene354 400
• AutoFact
N-acylsphingosine amidohydrolase n=6 Tax=Tetraodontidae RepID=Q8JG45_TAKRU
2.0e-40
• FL-Next
tr=N-acylsphingosine amidohydrolase; Takifugu rubripes (Japanese pufferfish) (Fugu rubripes).
0.0
• Sma3
None-
C-terminus
hpt_m_f1_v1.0_unigene356 482
• AutoFact
similar to 10 kda heat shock protein, mitochondrial (Hsp10) (10 kda chaperonin) (CPN10); K04078 chaperonin GroES
4.00001e-40
• FL-Next
sp=10 kda heat shock protein, mitochondrial; Oryzias latipes (Medaka fish) (Japanese ricefish).
0.0
• Sma3
heat shock protein 10
2.275e-23
Complete
hpt_m_f1_v1.0_unigene358 356
• AutoFact
calcium channel, voltage-dependent, N type, alpha 1B subunit-like
9.0e-31
• FL-Next
tr=Novel protein similar to vertebrate two pore segment channel 1 (tpcn1); Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
Novel protein similar to vertebrate two pore segment channel 1 (tpcn1)
8.371e-06
Putative C-terminus


Juntadeandalucia

IFAPA Centro El Toruño. Ctra. N. IV Km. 654a. Camino de Tiro Pichón. El Puerto de Santa María (Cádiz), Spain.
Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29590 Campanillas (Málaga), Spain