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Assembly Name: Hypothalamus m-f1 v1.0

Listing Annotated UniGenes

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Help Complete | Putative Complete | N-terminus | Putative N-terminus | Internal | C-terminus | Putative C-terminus | Coding | Putative Coding | Putative ncRNA | Misassembled | Unknown


Search: Containing in

Name Length
SoftwareDescriptionE-value
FL-next Status Origin of reads
hpt_m_f1_v1.0_unigene269 381
• AutoFact
PREDICTED: tubulin alpha-1D chain-like n=2 Tax=Deuterostomia RepID=UPI00020F72DE
4.0e-37
• FL-Next
tr=Tuba8l4 protein; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
tubulin, alpha 4
9.704e-09
C-terminus
hpt_m_f1_v1.0_unigene271 298
• AutoFact
probable arylformamidase n=1 Tax=Salmo salar RepID=AFMID_SALSA
4.0e-34
• FL-Next
sp=probable arylformamidase; Salmo salar (Atlantic salmon).
0.0
• Sma3
probable arylformamidase
9.087e-11
Putative N-terminus
hpt_m_f1_v1.0_unigene275 432
• AutoFact
syngr2b, wu:fj62c03, zgc:162081; synaptogyrin 2b
2.0e-23
• FL-Next
tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
synaptogyrin 1
8.023e-10
N-terminus
hpt_m_f1_v1.0_unigene276 703
• AutoFact
thioredoxin domain containing 9 n=1 Tax=Danio rerio RepID=Q7ZVX9_DANRE
0.0
• FL-Next
tr=thioredoxin domain containing 9; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
thioredoxin domain-containing protein 9
1.223e-14
C-terminus
hpt_m_f1_v1.0_unigene277 367
• AutoFact
mediator of rna polymerase II transcription subunit 6 n=1 Tax=Anoplopoma fimbria RepID=C3KHJ1_ANOFI
0.0
• FL-Next
tr=mediator of rna polymerase II transcription subunit 6; Anoplopoma fimbria (Sablefish).
0.0
• Sma3
mediator of rna polymerase II transcription subunit 6
1.459e-36
N-terminus
hpt_m_f1_v1.0_unigene279 385
• AutoFact
prpf3, hprp3, hprp3P; PRP3 pre-mRNA processing factor 3 homolog (yeast); K12843 U4/U6 small nuclear ribonucleoprotein PRP3
2.0e-28
• FL-Next
tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
U4/U6-associated splicing factor hprp3
8.991e-06
C-terminus
hpt_m_f1_v1.0_unigene281 596
• AutoFact
ubr7, fb74a06, wu:fb74a06, wu:fi29b06, zgc:55404; ubiquitin protein ligase E3 component n-recognin 7; K11979 E3 ubiquitin-protein ligase UBR7
5.00264e-43
• FL-Next
tr=C14orf130 homolog; Anoplopoma fimbria (Sablefish).
0.0
• Sma3
Novel protein (zgc:55404)
7.75e-06
Internal
hpt_m_f1_v1.0_unigene282 222
• AutoFact
HNRNPH1, hnrph1; heterogeneous nuclear ribonucleoprotein H1 (H); K12898 heterogeneous nuclear ribonucleoprotein F/H
6.0e-06
• FL-Next
tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
Novel protein similar to vertebrate heterogeneous nuclear ribonucleoprotein H1 (H) (hnrph1, zgc:136953)
3.255e-06
N-terminus
hpt_m_f1_v1.0_unigene283 295
• AutoFact
PREDICTED: similar to 60S ribosomal protein l10 (QM protein) (Tumor suppressor QM) (Laminin receptor homolog) n=1 Tax=Pan troglodytes RepID=UPI0000E23490
9.0e-39
• FL-Next
tr=QM-like protein; Sciaenops ocellatus (Red drum).
0.0
• Sma3
ribosomal protein l10
3.938e-18
C-terminus
hpt_m_f1_v1.0_unigene286 556
• AutoFact
Succinate dehydrogenase complex, subunit B iron sulfur n=10 Tax=Euteleostei RepID=B5DGH6_SALSA
0.0
• FL-Next
tr=Succinate dehydrogenase iron-sulfur subunit, mitochondrial; Anoplopoma fimbria (Sablefish).
0.0
• Sma3
iron-sulfur subunit of complex II
3.89e-18
C-terminus
hpt_m_f1_v1.0_unigene287 318
• AutoFact
abhydrolase domain containing 4 n=2 Tax=Danio rerio RepID=Q568J2_DANRE
3.0e-14
• FL-Next
tr=abhydrolase domain containing 4; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
Novel protein similar to vertebrate abhydrolase domain containing 4 (ABHD4)
2.79e-06
C-terminus
hpt_m_f1_v1.0_unigene289 690
• AutoFact
Psma2; si:rp71-45k5.4 (EC:3.4.25.1); K02726 20S proteasome subunit alpha 2 [EC:3.4.25.1]
8.0e-26
• FL-Next
sp=proteasome subunit alpha type; Osmerus mordax (Rainbow smelt) (Atherina mordax).
0.0
• Sma3
proteasome subunit alpha type
1.327e-12
C-terminus
hpt_m_f1_v1.0_unigene290 542
• AutoFact
tmem199, MGC109974, MGC174270, zgc:109974; transmembrane protein 199
9.99967e-42
• FL-Next
tr=Transmembrane protein 199; Salmo salar (Atlantic salmon).
0.0
• Sma3
Uncharacterized protein
0.0
N-terminus
hpt_m_f1_v1.0_unigene292 567
• AutoFact
Caldesmon multi-domain protein
1.0e-13
• FL-Next
None-
• Sma3
None-
unknown
hpt_m_f1_v1.0_unigene294 348
• AutoFact
serine/threonine-protein phosphatase n=2 Tax=Euteleostomi RepID=Q4S082_TETNG
3.0e-23
• FL-Next
sp=serine/threonine-protein phosphatase; Tetraodon nigroviridis (Green puffer).
0.0
• Sma3
serine/threonine-protein phosphatase
7.073e-07
C-terminus
hpt_m_f1_v1.0_unigene295 355
• AutoFact
cd63 (Fragment) n=1 Tax=Epinephelus coioides RepID=F2VQT2_EPICO
6.0e-31
• FL-Next
tr=cd63 antigen; Anoplopoma fimbria (Sablefish).
0.0
• Sma3
cd63 antigen
1.319e-26
Internal
hpt_m_f1_v1.0_unigene296 213
• AutoFact
PP1c_bdg domain containing protein
2.0e-17
• FL-Next
tr=Novel protein; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
Si:ch211-107o23.1 protein
2.48e-06
C-terminus
hpt_m_f1_v1.0_unigene297 481
• AutoFact
charged multivesicular body protein 1b n=1 Tax=Anoplopoma fimbria RepID=C3KJC8_ANOFI
0.0
• FL-Next
tr=charged multivesicular body protein 1b; Salmo salar (Atlantic salmon).
0.0
• Sma3
charged multivesicular body protein 1b
6.822e-36
C-terminus
hpt_m_f1_v1.0_unigene298 509
• AutoFact
synapse associated protein 1 n=4 Tax=Salmoninae RepID=B5DFU4_SALSA
2.0e-08
• FL-Next
tr=synapse-associated protein 1; Oncorhynchus mykiss (Rainbow trout) (Salmo gairdneri).
0.0
• Sma3
synapse associated protein 1
1.254e-10
C-terminus
hpt_m_f1_v1.0_unigene301 354
• AutoFact
exosome complex exonuclease rrp4 n=3 Tax=Salmo salar RepID=B5X6X1_SALSA
4.00001e-41
• FL-Next
tr=exosome complex exonuclease rrp4; Anoplopoma fimbria (Sablefish).
0.0
• Sma3
exosome component 2
3.188e-10
N-terminus


Juntadeandalucia

IFAPA Centro El Toruño. Ctra. N. IV Km. 654a. Camino de Tiro Pichón. El Puerto de Santa María (Cádiz), Spain.
Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29590 Campanillas (Málaga), Spain