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Assembly Name: Hypothalamus m-f1 v1.0

Listing Annotated UniGenes

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Help Complete | Putative Complete | N-terminus | Putative N-terminus | Internal | C-terminus | Putative C-terminus | Coding | Putative Coding | Putative ncRNA | Misassembled | Unknown


Search: Containing in

Name Length
SoftwareDescriptionE-value
FL-next Status Origin of reads
hpt_m_f1_v1.0_unigene115 311
• AutoFact
novel protein similar to vertebrate exosome component 1 (exosc1) n=1 Tax=Danio rerio RepID=B8A4H5_DANRE
1.0e-25
• FL-Next
tr=novel protein similar to vertebrate exosome component 1 (exosc1); Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
novel protein similar to vertebrate exosome component 1 (exosc1)
3.875e-06
N-terminus
hpt_m_f1_v1.0_unigene117 228
• AutoFact
casein kinase I isoform epsilon n=2 Tax=Euteleostei RepID=B5X3Z8_SALSA
6.0e-19
• FL-Next
tr=Chromosome undetermined SCAF7411, whole genome shotgun sequence; Tetraodon nigroviridis (Green puffer).
0.0
• Sma3
casein kinase I isoform epsilon
2.208e-13
C-terminus
hpt_m_f1_v1.0_unigene118 301
• AutoFact
ephrin type-B receptor 1 n=1 Tax=Salmo salar RepID=B5X8Z4_SALSA
1.0e-13
• FL-Next
tr=ephrin type-B receptor 1; Salmo salar (Atlantic salmon).
0.0
• Sma3
ephrin type-B receptor 1
4.066e-09
N-terminus
hpt_m_f1_v1.0_unigene120 415
• AutoFact
im:5617510, wu:fc08g11; si:dkey-147f20.5; K10745 ribonuclease H2 subunit C
4.0e-23
• FL-Next
tr=ribonuclease H2 subunit C; Osmerus mordax (Rainbow smelt) (Atherina mordax).
0.0
• Sma3
ribonuclease H2 subunit C
5.319e-16
N-terminus
hpt_m_f1_v1.0_unigene121 779
• AutoFact
fb71h08, wu:fb71h08; zgc:112330; K07023 putative hydrolases of HD superfamily
0.0
• FL-Next
tr=Hd domain-containing protein 2; Ictalurus punctatus (Channel catfish).
0.0
• Sma3
HD domain-containing protein 2
9.688e-11
Complete
hpt_m_f1_v1.0_unigene128 418
• AutoFact
ephrin receptor EphB1-like; K05110 Eph receptor B1 [EC:2.7.10.1]
4.0e-21
• FL-Next
tr=Chromosome 15 SCAF14992, whole genome shotgun sequence; Tetraodon nigroviridis (Green puffer).
0.0
• Sma3
ephrin type-B receptor 1
3.231e-08
C-terminus
hpt_m_f1_v1.0_unigene129 250
• AutoFact
UPF0172 domain containing protein
0.0001
• FL-Next
None-
• Sma3
None-
unknown
hpt_m_f1_v1.0_unigene133 481
• AutoFact
upf0547 protein c16orf87 homolog n=1 Tax=Danio rerio RepID=CP087_DANRE
6.0e-08
• FL-Next
sp=upf0547 protein c16orf87 homolog; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
upf0547 protein c16orf87 homolog
2.696e-11
C-terminus
hpt_m_f1_v1.0_unigene135 260
• AutoFact
60S acidic ribosomal protein P1 n=1 Tax=Gillichthys mirabilis RepID=Q9DFR0_GILMI
8.0e-14
• FL-Next
tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
ribosomal protein, large, P1
2.301e-10
Putative Complete
hpt_m_f1_v1.0_unigene142 398
• AutoFact
atg16l1, zgc:110147; atg16 autophagy related 16-like 1 (S. cerevisiae)
2.0e-19
• FL-Next
tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
atg16 autophagy related 16-like 1 (S. cerevisiae)
1.277e-14
N-terminus
hpt_m_f1_v1.0_unigene143 450
• AutoFact
rbm45, drb1, si:ch211-222f23.2; rna binding motif protein 45
4.0e-39
• FL-Next
tr=Novel protein similar to H.sapiens DRBP1, developmentally regulated rna binding protein 1 (DRBP1); Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
rna binding motif protein 45
3.685e-10
C-terminus
hpt_m_f1_v1.0_unigene146 379
• AutoFact
Herpes_gp2 domain containing protein
3.0e-05
• FL-Next
None-
• Sma3
None-
coding
hpt_m_f1_v1.0_unigene148 363
• AutoFact
Importin-4 n=1 Tax=Dicentrarchus labrax RepID=E6ZID3_DICLA
5.0e-37
• FL-Next
tr=Importin-4; Dicentrarchus labrax (European seabass) (Morone labrax).
0.0
• Sma3
Si:ch211-196f5.1 protein
6.82e-06
C-terminus
hpt_m_f1_v1.0_unigene149 414
• AutoFact
mediator of rna polymerase II transcription subunit 7 n=3 Tax=Euteleostomi RepID=MED7_DANRE
0.0
• FL-Next
tr=Med7 protein; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
mediator of rna polymerase II transcription subunit 7
3.018e-14
N-terminus
hpt_m_f1_v1.0_unigene151 440
• AutoFact
nucleolar complex protein 4 homolog n=2 Tax=Danio rerio RepID=NOC4L_DANRE
0.0
• FL-Next
tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
nucleolar complex protein 4 homolog
3.188e-10
Internal
hpt_m_f1_v1.0_unigene152 303
• AutoFact
thioesterase superfamily member 2 n=1 Tax=Salmo salar RepID=B9ELN1_SALSA
3.0e-28
• FL-Next
tr=Novel protein similar to vertebrate thioesterase superfamily member 2 (THEM2); Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
thioesterase superfamily member 2
7.285e-06
N-terminus
hpt_m_f1_v1.0_unigene153 618
• AutoFact
sec23ip, MGC152883, si:dkey-192p21.3, wu:fa20e07, zgc:152883; sec23 interacting protein
0.0
• FL-Next
tr=sec23 interacting protein; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
sec23 interacting protein
5.548e-14
Internal
hpt_m_f1_v1.0_unigene154 579
• AutoFact
pdcd8, AIF, zgc:91994; programmed cell death 8 (apoptosis-inducing factor); K04727 programmed cell death 8 (apoptosis-inducing factor) [EC:1.-.-.-]
0.0
• FL-Next
tr=Pdcd8 protein; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
programmed cell death 8
2.101e-10
Putative C-terminus
hpt_m_f1_v1.0_unigene155 242
• AutoFact
phd finger-like domain-containing protein 5A n=1 Tax=Salmo salar RepID=B9ENX1_SALSA
2.0e-31
• FL-Next
tr=phd finger-like domain-containing protein 5A; Salmo salar (Atlantic salmon).
0.0
• Sma3
phd finger protein 5A
6.271e-11
N-terminus
hpt_m_f1_v1.0_unigene156 467
• AutoFact
coiled-coil domain containing 109B
0.0
• FL-Next
tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
Uncharacterized protein
4.508e-06
Internal


Juntadeandalucia

IFAPA Centro El Toruño. Ctra. N. IV Km. 654a. Camino de Tiro Pichón. El Puerto de Santa María (Cádiz), Spain.
Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29590 Campanillas (Málaga), Spain