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Assembly Name: Hypothalamus m-f1 v1.0

Listing Annotated UniGenes

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Help Complete | Putative Complete | N-terminus | Putative N-terminus | Internal | C-terminus | Putative C-terminus | Coding | Putative Coding | Putative ncRNA | Misassembled | Unknown


Search: Containing in

Name Length
SoftwareDescriptionE-value
FL-next Status Origin of reads
hpt_m_f1_v1.0_unigene32 364
• AutoFact
eif3ea, MGC63821, eIF3-p48, eif3s6, eif3s6a, fc55e01, wu:fc55e01, zgc:63821; eukaryotic translation initiation factor 3, subunit E, a; K03250 translation initiation factor eIF-3 subunit 6
0.0
• FL-Next
sp=eukaryotic translation initiation factor 3 subunit E; Salmo salar (Atlantic salmon).
0.0
• Sma3
eukaryotic translation initiation factor 3 subunit E
1.258e-08
Internal
hpt_m_f1_v1.0_unigene34 469
• AutoFact
Fam185a, 4631428I10, AI847670; family with sequence similarity 185, member A
5.0e-21
• FL-Next
tr=Chromosome 13 SCAF14715, whole genome shotgun sequence; Tetraodon nigroviridis (Green puffer).
0.0
• Sma3
family with sequence similarity 185, member A
3.1e-06
Internal
hpt_m_f1_v1.0_unigene37 694
• AutoFact
26s protease regulatory subunit 10B n=41 Tax=Euteleostomi RepID=PRS10_HUMAN
0.0
• FL-Next
tr=Chromosome undetermined SCAF11176, whole genome shotgun sequence; Tetraodon nigroviridis (Green puffer).
0.0
• Sma3
Proteasome (prosome, macropain) 26s subunit, ATPase, 6
3.457e-08
Internal
hpt_m_f1_v1.0_unigene38 369
• AutoFact
barrier-to-autointegration factor n=3 Tax=Euteleostei RepID=C1BJ57_OSMMO
4.0e-15
• FL-Next
tr=barrier-to-autointegration factor; Esox lucius (Northern pike).
0.0
• Sma3
barrier-to-autointegration factor
6.433e-09
C-terminus
hpt_m_f1_v1.0_unigene39 531
• AutoFact
Chromate_transp domain containing protein
6.0e-05
• FL-Next
tr=Novel protein; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
Si:ch211-161h7.5
2.945e-06
C-terminus
hpt_m_f1_v1.0_unigene42 426
• AutoFact
cellular nucleic acid-binding protein n=11 Tax=Clupeocephala RepID=Q801Z9_DANRE
2.0e-28
• FL-Next
tr=Zinc finger protein 9; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
cellular nucleic acid-binding protein
3.041e-26
C-terminus
hpt_m_f1_v1.0_unigene43 378
• AutoFact
otx2, MGC136535, id:ibd2915, zOtx2, zgc:136535, zotx-2; orthodenticle homolog 2; K09326 homeobox protein OTX
2.0e-14
• FL-Next
tr=Otx2 protein; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
OTX5 protein
2.281e-12
C-terminus
hpt_m_f1_v1.0_unigene44 506
• AutoFact
etfdh, wu:fa05a11, wu:fb71g06, zgc:92093; electron-transferring-flavoprotein dehydrogenase (EC:1.5.5.1); K00311 electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1]
0.0
• FL-Next
tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
electron-transferring-flavoprotein dehydrogenase
4.602e-10
C-terminus
hpt_m_f1_v1.0_unigene45 326
• AutoFact
von Hippel-Lindau binding protein 1 n=3 Tax=Clupeocephala RepID=Q503D5_DANRE
9.0e-37
• FL-Next
tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
Prefoldin subunit 3
1.968e-10
Internal
hpt_m_f1_v1.0_unigene48 289
• AutoFact
adcy3, si:ch211-153j24.5; adenylate cyclase 3; K08043 adenylate cyclase 3 [EC:4.6.1.1]
3.99931e-42
• FL-Next
tr=Chromosome undetermined SCAF14103, whole genome shotgun sequence; Tetraodon nigroviridis (Green puffer).
0.0
• Sma3
adenylate cyclase 3
4.268e-08
Internal
hpt_m_f1_v1.0_unigene50 250
• AutoFact
PREDICTED: similar to mCG20113 n=1 Tax=Equus caballus RepID=UPI00017961D9
8.0e-16
• FL-Next
tr=Myeloma overexpressed gene 2 protein-like protein; Ictalurus punctatus (Channel catfish).
0.0
• Sma3
Chromosome 15 SCAF11954, whole genome shotgun sequence.
0.0
Complete
hpt_m_f1_v1.0_unigene55 508
• AutoFact
atp synthase subunit alpha n=3 Tax=Euteleostei RepID=B5X195_SALSA
0.0
• FL-Next
sp=atp synthase subunit alpha; Tetraodon nigroviridis (Green puffer).
0.0
• Sma3
atp synthase subunit alpha, mitochondrial
1.406e-10
C-terminus
hpt_m_f1_v1.0_unigene59 403
• AutoFact
PREDICTED: 60s ribosomal protein l36a-like n=1 Tax=Macaca mulatta RepID=UPI0000D9F51E
0.0
• FL-Next
tr=60s ribosomal protein l36a; Ictalurus furcatus (blue catfish).
0.0
• Sma3
60s ribosomal protein l36a
0.0
Complete
hpt_m_f1_v1.0_unigene63 355
• AutoFact
Unassigned protein
0.0
• FL-Next
tr=Proline-rich protein bca3; Salmo salar (Atlantic salmon).
0.0
• Sma3
Proline-rich protein bca3
2.17e-06
N-terminus
hpt_m_f1_v1.0_unigene66 569
• AutoFact
ATP-dependent rna helicase DDX18 (Fragment) n=6 Tax=Euteleostei RepID=C0PTY8_SALSA
0.0
• FL-Next
tr=Myc-regulated dead/H box 18 rna helicase; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
dead (Asp-Glu-Ala-Asp) box polypeptide 18
1.735e-13
C-terminus
hpt_m_f1_v1.0_unigene67 349
• AutoFact
mitochondrial 28s ribosomal protein s33 n=1 Tax=Anoplopoma fimbria RepID=C3KJA7_ANOFI
1.0e-24
• FL-Next
tr=mitochondrial 28s ribosomal protein s33; Anoplopoma fimbria (Sablefish).
0.0
• Sma3
mitochondrial 28s ribosomal protein s33
6.163e-19
N-terminus
hpt_m_f1_v1.0_unigene69 340
• AutoFact
proteasome subunit beta type n=1 Tax=Anoplopoma fimbria RepID=C3KJN7_ANOFI
9.99995e-41
• FL-Next
sp=proteasome subunit beta type; Anoplopoma fimbria (Sablefish).
0.0
• Sma3
proteasome subunit beta type
0.0
N-terminus
hpt_m_f1_v1.0_unigene72 650
• AutoFact
dtwD1; dtw domain containing 1
0.0
• FL-Next
sp=dtw domain-containing protein 1; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
dtw domain-containing protein 1
2.382e-16
Putative C-terminus
hpt_m_f1_v1.0_unigene73 413
• AutoFact
Zgc:92345 n=3 Tax=Clupeocephala RepID=Q6DHF2_DANRE
8.0e-38
• FL-Next
tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
Family with sequence similarity 96, member B
4.138e-11
N-terminus
hpt_m_f1_v1.0_unigene74 300
• AutoFact
PREDICTED: ArfGAP with FG repeats 2-like n=1 Tax=Saccoglossus kowalevskii RepID=UPI0001CBA9A4
3.0e-05
• FL-Next
tr=HIV-1 rev binding protein; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
HIV-1 rev binding protein
5.27e-06
Internal


Juntadeandalucia

IFAPA Centro El Toruño. Ctra. N. IV Km. 654a. Camino de Tiro Pichón. El Puerto de Santa María (Cádiz), Spain.
Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29590 Campanillas (Málaga), Spain