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Assembly Name: Hypothalamus m-f1 v1.0

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Help Complete | Putative Complete | N-terminus | Putative N-terminus | Internal | C-terminus | Putative C-terminus | Coding | Putative Coding | Putative ncRNA | Misassembled | Unknown


Search: Containing in

Name Length
SoftwareDescriptionE-value
FL-next Status Origin of reads
hpt_m_f1_v1.0_unigene15 541
• AutoFact
Novel protein (Zgc:92854) n=6 Tax=Clupeocephala RepID=Q6DGM5_DANRE
0.0
• FL-Next
tr=Noelin; Osmerus mordax (Rainbow smelt) (Atherina mordax).
0.0
• Sma3
Noelin
0.0
Complete
hpt_m_f1_v1.0_unigene50 250
• AutoFact
PREDICTED: similar to mCG20113 n=1 Tax=Equus caballus RepID=UPI00017961D9
8.0e-16
• FL-Next
tr=Myeloma overexpressed gene 2 protein-like protein; Ictalurus punctatus (Channel catfish).
0.0
• Sma3
Chromosome 15 SCAF11954, whole genome shotgun sequence.
0.0
Complete
hpt_m_f1_v1.0_unigene59 403
• AutoFact
PREDICTED: 60s ribosomal protein l36a-like n=1 Tax=Macaca mulatta RepID=UPI0000D9F51E
0.0
• FL-Next
tr=60s ribosomal protein l36a; Ictalurus furcatus (blue catfish).
0.0
• Sma3
60s ribosomal protein l36a
0.0
Complete
hpt_m_f1_v1.0_unigene121 779
• AutoFact
fb71h08, wu:fb71h08; zgc:112330; K07023 putative hydrolases of HD superfamily
0.0
• FL-Next
tr=Hd domain-containing protein 2; Ictalurus punctatus (Channel catfish).
0.0
• Sma3
HD domain-containing protein 2
9.688e-11
Complete
hpt_m_f1_v1.0_unigene356 482
• AutoFact
similar to 10 kda heat shock protein, mitochondrial (Hsp10) (10 kda chaperonin) (CPN10); K04078 chaperonin GroES
4.00001e-40
• FL-Next
sp=10 kda heat shock protein, mitochondrial; Oryzias latipes (Medaka fish) (Japanese ricefish).
0.0
• Sma3
heat shock protein 10
2.275e-23
Complete
hpt_m_f1_v1.0_unigene368 861
• AutoFact
Ras-related protein rab-1A n=52 Tax=Eukaryota RepID=rab1A_HUMAN
0.0
• FL-Next
tr=Ras-related protein rab-1A; Salmo salar (Atlantic salmon).
0.0
• Sma3
Uncharacterized protein
0.0
Complete
hpt_m_f1_v1.0_unigene402 688
• AutoFact
Churchill protein n=4 Tax=Euteleostei RepID=B5XGR1_SALSA
0.0
• FL-Next
tr=Churchill protein; Salmo salar (Atlantic salmon).
0.0
• Sma3
Uncharacterized protein
0.0
Complete
hpt_m_f1_v1.0_unigene406 828
• AutoFact
40s ribosomal protein S6 n=62 Tax=Euteleostomi RepID=RS6_HUMAN
0.0
• FL-Next
sp=40s ribosomal protein S6; Solea senegalensis (Senegalese sole).
0.0
• Sma3
40s ribosomal protein S6
0.0
Complete
hpt_m_f1_v1.0_unigene410 310
• AutoFact
Mitochondrial cytochrome c oxidase subunit 7c n=2 Tax=Ictalurus RepID=E3TDC2_9TELE
1.0e-24
• FL-Next
tr=cytochrome c oxidase, subunit viic; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
cytochrome c oxidase, subunit viic
0.0
Complete
hpt_m_f1_v1.0_unigene499 433
• AutoFact
NADH dehydrogenase 1 alpha subcomplex subunit 5 n=2 Tax=Salmo salar RepID=B5X973_SALSA
7.00649e-45
• FL-Next
tr=NADH dehydrogenase 1 alpha subcomplex subunit 5; Salmo salar (Atlantic salmon).
0.0
• Sma3
Uncharacterized protein
0.0
Complete
hpt_m_f1_v1.0_unigene531 608
• AutoFact
GTP-binding nuclear protein gsp1 ran n=1 Tax=Grosmannia clavigera kw1407 RepID=F0XHE0_GROCL
0.0
• FL-Next
tr=GTP-binding nuclear protein ran; Anoplopoma fimbria (Sablefish).
0.0
• Sma3
ran protein
0.0
Complete
hpt_m_f1_v1.0_unigene537 492
• AutoFact
cyclic amp phosphoprotein n=2 Tax=Percomorpha RepID=A0EZX6_PSEMX
0.0
• FL-Next
tr=cyclic amp phosphoprotein; Psetta maxima (Turbot) (Pleuronectes maximus).
0.0
• Sma3
cyclic amp phosphoprotein
0.0
Complete
hpt_m_f1_v1.0_unigene643 411
• AutoFact
coiled-coil domain-containing protein 23 n=3 Tax=Euteleostei RepID=B9EMC0_SALSA
1.0e-28
• FL-Next
tr=coiled-coil domain-containing protein 23; Dicentrarchus labrax (European seabass) (Morone labrax).
0.0
• Sma3
coiled-coil domain-containing protein 23
0.0
Complete
hpt_m_f1_v1.0_unigene687 395
• AutoFact
60s acidic ribosomal protein P2 n=22 Tax=Eutheria RepID=RLA2_HUMAN
5.0e-18
• FL-Next
tr=60s acidic ribosomal protein P2; Salmo salar (Atlantic salmon).
0.0
• Sma3
60s acidic ribosomal protein P2
5.691e-38
Complete
hpt_m_f1_v1.0_unigene690 324
• AutoFact
NADH dehydrogenase 1 alpha subcomplex subunit 1 n=1 Tax=Anoplopoma fimbria RepID=C3KI11_ANOFI
3.0e-28
• FL-Next
tr=Chromosome 1 SCAF14998, whole genome shotgun sequence; Tetraodon nigroviridis (Green puffer).
0.0
• Sma3
Uncharacterized protein
0.0
Complete
hpt_m_f1_v1.0_unigene701 261
• AutoFact
PREDICTED: 60S ribosomal protein l39-like n=1 Tax=Monodelphis domestica RepID=UPI00020F7621
4.0e-23
• FL-Next
tr=Putative ribosomal protein l39 protein; Oncorhynchus mykiss (Rainbow trout) (Salmo gairdneri).
0.0
• Sma3
Putative ribosomal protein l39 protein
0.0
Complete
hpt_m_f1_v1.0_unigene771 664
• AutoFact
lsm8 homolog, U6 small nuclear RNA associated (S. cerevisiae); K12627 U6 snrna-associated Sm-like protein lsm8
1.00053e-42
• FL-Next
tr=U6 snrna-associated Sm-like protein lsm8; Salmo salar (Atlantic salmon).
0.0
• Sma3
U6 snrna-associated Sm-like protein lsm8
0.0
Complete
hpt_m_f1_v1.0_unigene907 367
• AutoFact
Dpy-30 homolog n=3 Tax=Salmo salar RepID=B5XAW5_SALSA
2.00386e-43
• FL-Next
tr=Dpy-30 homolog; Esox lucius (Northern pike).
0.0
• Sma3
Chromosome undetermined SCAF2480, whole genome shotgun sequence.
0.0
Complete
hpt_m_f1_v1.0_unigene1011 606
• AutoFact
ostc, MGC56559, zgc:56559, zgc:86623; oligosaccharyltransferase complex subunit
0.0
• FL-Next
tr=UPF0527 membrane protein; Esox lucius (Northern pike).
0.0
• Sma3
UPF0527 membrane protein
0.0
Complete
hpt_m_f1_v1.0_unigene1029 466
• AutoFact
ACYP1, ACYPE; acylphosphatase 1, erythrocyte (common) type (EC:3.6.1.7); K01512 acylphosphatase [EC:3.6.1.7]
2.0e-35
• FL-Next
sp=Acylphosphatase; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
None-
Complete


Juntadeandalucia

IFAPA Centro El Toruño. Ctra. N. IV Km. 654a. Camino de Tiro Pichón. El Puerto de Santa María (Cádiz), Spain.
Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29590 Campanillas (Málaga), Spain