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Assembly Name: Gonads v1

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Help Complete | Putative Complete | N-terminus | Putative N-terminus | Internal | C-terminus | Putative C-terminus | Coding | Putative Coding | Putative ncRNA | Misassembled | Unknown


Search: Containing in

Name Length
SoftwareDescriptionE-value
FL-next Status Origin of reads
gonads_v1_unigene21 1187
• AutoFact
zgc:92126; K03141 transcription initiation factor TFIIH subunit H1
0.0
• FL-Next
tr=Novel protein containing RNA recognition motifs (A.k.a. RRM, RBD, or RNP domain); Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
Uncharacterized protein
0.0
N-terminus
gonads_v1_unigene22 1211
• AutoFact
pou5f1, POU-2, cb197, chunp6868, gp-9, gp9, oct4, pou2, spg/pou2, wu:fd18d06; POU domain, class 5, transcription factor 1; K09369 POU domain transcription factor, class 7
0.0
• FL-Next
tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
Zgc:92126
8.681e-06
C-terminus
gonads_v1_unigene23 1417
• AutoFact
ube4b, MGC109766, UFD2, zgc:109766; ubiquitination factor E4B, UFD2 homolog (S. cerevisiae); K10597 ubiquitin conjugation factor E4 B [EC:6.3.2.19]
0.0
• FL-Next
tr=POU domain protein class V transcription factor 1; Oryzias latipes (Medaka fish) (Japanese ricefish).
0.0
• Sma3
Pit-1 protein
1.892e-11
C-terminus
gonads_v1_unigene24 1111
• AutoFact
DnaJ homolog subfamily C member 3 n=1 Tax=Salmo salar RepID=B5X4V9_SALSA
0.0
• FL-Next
tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
None-
C-terminus
gonads_v1_unigene25 2064
• AutoFact
PREDICTED: PWWP domain-containing protein MUM1-like, partial n=1 Tax=Xenopus (Silurana) tropicalis RepID=UPI0001DE89D1
2.0e-06
• FL-Next
tr=DnaJ homolog subfamily C member 3; Salmo salar (Atlantic salmon).
0.0
• Sma3
DnaJ (Hsp40) homolog, subfamily C, member 3
1.289e-17
Complete
gonads_v1_unigene26 1035
• AutoFact
DnaJ homolog subfamily A member 1 n=1 Tax=Salmo salar RepID=B5X2Y0_SALSA
0.0
• FL-Next
tr=Chromosome 5 SCAF15026, whole genome shotgun sequence; Tetraodon nigroviridis (Green puffer).
0.0
• Sma3
None-
Putative C-terminus
gonads_v1_unigene27 1410
• AutoFact
notch2, notch6, sb:cb884; notch homolog 2; K02599 Notch
0.0
• FL-Next
tr=DnaJ homolog subfamily A member 1; Salmo salar (Atlantic salmon).
0.0
• Sma3
Uncharacterized protein
0.0
Putative Complete
gonads_v1_unigene28 1024
• AutoFact
Mitogen-activated protein kinase 9 n=41 Tax=Amniota RepID=MK09_HUMAN
0.0
• FL-Next
tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
None-
N-terminus
gonads_v1_unigene29 1803
• AutoFact
si:dkey-57a22.7; K03515 DNA repair protein REV1 [EC:2.7.7.-]
0.0
• FL-Next
tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
Chromosome 1 SCAF14632, whole genome shotgun sequence.
0.0
C-terminus
gonads_v1_unigene30 907
• AutoFact
tube1, MGC63582, zgc:63582; tubulin, epsilon 1; K10391 tubulin epsilon
0.0
• FL-Next
tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
None-
N-terminus
gonads_v1_unigene31 1278
• AutoFact
PREDICTED: glia maturation factor beta-like n=1 Tax=Meleagris gallopavo RepID=UPI00020359C2
0.0
• FL-Next
tr=Novel protein similar to human tubulin epsilon 1 (TUBE1); Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
tubulin, epsilon 1
4.252e-17
N-terminus
gonads_v1_unigene32 1428
• AutoFact
MGC171674; zgc:171674
0.0
• FL-Next
tr=Glia maturation factor, beta; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
Gmfb protein
0.0
Complete
gonads_v1_unigene33 1373
• AutoFact
Argininosuccinate synthase (Fragment) n=4 Tax=Tetraodontidae RepID=Q4SJK9_TETNG
0.0
• FL-Next
tr=FAM82B; Anoplopoma fimbria (Sablefish).
0.0
• Sma3
FAM82B
1.298e-10
Complete
gonads_v1_unigene34 1529
• AutoFact
Unassigned protein
0.0
• FL-Next
sp=Argininosuccinate synthase; Salmo salar (Atlantic salmon).
0.0
• Sma3
Uncharacterized protein
0.0
Complete
gonads_v1_unigene35 1115
• AutoFact
None-
• FL-Next
tr=Tectonic-3; Dicentrarchus labrax (European seabass) (Morone labrax).
0.0
• Sma3
Tectonic-3
1.24e-06
C-terminus
gonads_v1_unigene36 1247
• AutoFact
GLT1D1; glycosyltransferase 1 domain containing 1
1.4013e-45
• FL-Next
None-
• Sma3
None-
Putative coding
gonads_v1_unigene37 744
• AutoFact
similar to erythroid differentiation-related factor 1
0.0
• FL-Next
tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
MGC81837 protein
8.526e-06
C-terminus
gonads_v1_unigene38 1316
• AutoFact
Beclin 1 n=9 Tax=Euteleostei RepID=Q4A1K8_TETNG
0.0
• FL-Next
tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
Chromosome 10 open reading frame 137
4.185e-06
N-terminus
gonads_v1_unigene39 1285
• AutoFact
Mucolipin 2 n=1 Tax=Danio rerio RepID=Q803Y8_DANRE
0.0
• FL-Next
tr=Beclin-1; Dicentrarchus labrax (European seabass) (Morone labrax).
0.0
• Sma3
Beclin-1
1.791e-09
C-terminus
gonads_v1_unigene40 1073
• AutoFact
COP9 signalosome complex subunit 5 n=34 Tax=Euteleostomi RepID=CSN5_HUMAN
0.0
• FL-Next
tr=Mucolipin 2; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
Uncharacterized protein
1.725e-09
C-terminus


Juntadeandalucia

IFAPA Centro El Toruño. Ctra. N. IV Km. 654a. Camino de Tiro Pichón. El Puerto de Santa María (Cádiz), Spain.
Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29590 Campanillas (Málaga), Spain