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Assembly Name: Gonads v1
General Information
Organism: Solea senegalensis
Tissue: testis and ovary
Description: RNA from Solea senegalensis testis and ovary tissue sequenced using 454 Titanium sequencing technologie.
Assembly Statistics
Number of used reads: 934429
Number of unigenes: 64637
Mean contig length: 374
SNPs statistics
Tot. SNPs: 115083
Unigenes with SNPs: 26964
Mean SNPs per unigene: 4.2
SSRs statistics
Tot. SSRs: 11246
Mean SSRs per unigene: 1.2
SSRs di-nucl. : 3424
SSRs tri-nucl. : 5055
SSRs > tri-nucl. : 2767
Annotations statistics
Annotated unigenes: 63940
Descriptions: 42989
Gos: 2797
Interpros: 7031
ECs: 850
Keggs: 141
Project components

Assembly components:

Unigenes file: gonads_unigenes.fasta

ACE file: gonads.ace



Download annotations for specified unigenes:

Paste your unigenes names list (one unigene per line):
Maximum 10 000 names


Or upload unigenes file with names list (one unigene per line):


SFFs:
File 1: G917EGR01.sff

File 2: G917EGR02.sff


SeqTrimNext reports:

File 1: G917EGR01_report.pdf

File 2: G917EGR02_report.pdf





Juntadeandalucia

IFAPA Centro El Toruño. Ctra. N. IV Km. 654a. Camino de Tiro Pichón. El Puerto de Santa María (Cádiz), Spain.
Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29590 Campanillas (Málaga), Spain