RNA from Solea senegalensis testis and ovary tissue sequenced using 454 Titanium sequencing technologie.
Assembly Statistics
Number of used reads:
934429
Number of unigenes:
64637
Mean contig length:
374
SNPs statistics
Tot. SNPs:
115083
Unigenes with SNPs:
26964
Mean SNPs per unigene:
4.2
SSRs statistics
Tot. SSRs:
11246
Mean SSRs per unigene:
1.2
SSRs di-nucl. :
3424
SSRs tri-nucl. :
5055
SSRs > tri-nucl. :
2767
Annotations statistics
Annotated unigenes:
63940
Descriptions:
42989
Gos:
2797
Interpros:
7031
ECs:
850
Keggs:
141
Project components
Assembly components:
Unigenes file:
gonads_unigenes.fasta
ACE file:
gonads.ace
Download annotations for specified unigenes:
SFFs:
File 1:
G917EGR01.sff
File 2:
G917EGR02.sff
SeqTrimNext reports:
File 1:
G917EGR01_report.pdf
File 2:
G917EGR02_report.pdf
IFAPA Centro El Toruño. Ctra. N. IV Km. 654a. Camino de Tiro Pichón. El Puerto de Santa María (Cádiz), Spain. Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29590 Campanillas (Málaga), Spain