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Assembly Name: Hypothalamus v1

Listing Annotated UniGenes

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Help Complete | Putative Complete | N-terminus | Putative N-terminus | Internal | C-terminus | Putative C-terminus | Coding | Putative Coding | Putative ncRNA | Misassembled | Unknown


Search: Containing in

Name Length
SoftwareDescriptionE-value
FL-next Status Origin of reads
hypoth_v1_unigene55395 384
• AutoFact
vars2, si:ch211-152p11.2; valyl-tRNA synthetase 2, mitochondrial (putative); K01873 valyl-tRNA synthetase [EC:6.1.1.9]
7.0e-21
• FL-Next
tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
Si:ch211-152p11.2 protein
4.34e-06
Internal
hypoth_v1_unigene55400 265
• AutoFact
Unassigned protein
0.0
• FL-Next
tr=Chromosome 1 SCAF10151, whole genome shotgun sequence; Tetraodon nigroviridis (Green puffer).
0.0
• Sma3
FABP6-like
3.565e-06
Putative N-terminus
hypoth_v1_unigene55411 608
• AutoFact
grhpra, MGC109900, grhpr, si:ch211-240l14.3, zgc:109900; glyoxylate reductase/hydroxypyruvate reductase a (EC:1.1.1.79)
0.0
• FL-Next
tr=Novel protein similar to human glyoxylate reductase/hydroxypyruvate reductase (grhpr); Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
glyoxylate reductase/hydroxypyruvate reductase
1.923e-27
Putative C-terminus
hypoth_v1_unigene55413 187
• AutoFact
Vdac1 protein n=7 Tax=Clupeocephala RepID=Q6NWC1_DANRE
7.0e-16
• FL-Next
tr=Voltage-dependent anion-selective channel protein 1; Salmo salar (Atlantic salmon).
0.0
• Sma3
Voltage-dependent anion-selective channel protein 2
4.031e-38
Internal
hypoth_v1_unigene55417 174
• AutoFact
None-
• FL-Next
None-
• Sma3
RNA-binding Raly-like protein
5.27e-06
unknown
hypoth_v1_unigene55418 234
• AutoFact
DUF1777 multi-domain protein
8.0e-09
• FL-Next
None-
• Sma3
None-
Putative coding
hypoth_v1_unigene55422 733
• AutoFact
Alpha2 d1 adrenergic receptor n=2 Tax=Takifugu rubripes RepID=Q8JG01_TAKRU
0.0
• FL-Next
tr=Alpha2 d1 adrenergic receptor; Takifugu rubripes (Japanese pufferfish) (Fugu rubripes).
0.0
• Sma3
Alpha-2B adrenergic receptor
1.696e-15
Internal
hypoth_v1_unigene55438 209
• AutoFact
bHLH protein dec2 [oryzias latipes] dbj|BAE78765.1| bHLH protein dec2 [oryzias latipes]
2.0e-08
• FL-Next
tr=BHLH protein dec2; oryzias latipes (Medaka fish) (Japanese ricefish).
0.0
• Sma3
Class B basic helix-loop-helix protein 3
7.905e-06
N-terminus
hypoth_v1_unigene55452 264
• AutoFact
interleukin-8-like protein n=1 Tax=Siniperca chuatsi RepID=Q2KKU7_SINCH
3.0e-14
• FL-Next
tr=interleukin-8-like protein; Siniperca chuatsi (Chinese perch).
0.0
• Sma3
interleukin-8 like protein
1.395e-06
N-terminus
hypoth_v1_unigene55459 308
• AutoFact
HNOBA domain containing protein
7.0e-09
• FL-Next
tr=Chromosome undetermined SCAF13692, whole genome shotgun sequence; Tetraodon nigroviridis (Green puffer).
0.0
• Sma3
None-
Internal
hypoth_v1_unigene55460 172
• AutoFact
tho complex subunit 7 homolog n=4 Tax=Percomorpha RepID=E6ZFZ2_DICLA
1.0e-08
• FL-Next
tr=tho complex subunit 7 homolog; Dicentrarchus labrax (European seabass) (Morone labrax).
0.0
• Sma3
tho complex subunit 7 homolog
1.153e-19
N-terminus
hypoth_v1_unigene55464 385
• AutoFact
nudcd3, zgc:77067; nudc domain containing 3
0.0
• FL-Next
tr=nudc domain containing 3; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
nudc domain containing 3
3.252e-10
C-terminus
hypoth_v1_unigene55468 246
• AutoFact
churchill protein n=4 Tax=Euteleostei RepID=B5XGR1_SALSA
2.0e-21
• FL-Next
tr=churchill protein; Salmo salar (Atlantic salmon).
0.0
• Sma3
churchill protein
1.7e-15
Putative N-terminus


Juntadeandalucia

IFAPA Centro El Toruño. Ctra. N. IV Km. 654a. Camino de Tiro Pichón. El Puerto de Santa María (Cádiz), Spain.
Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29590 Campanillas (Málaga), Spain