RNA from Solea senegalensis Hypothalamus tissue sequenced using 454 Titanium sequencing technologie.
Assembly Statistics
Number of used reads:
348799
Number of unigenes:
55469
Mean contig length:
269
SNPs statistics
Tot. SNPs:
82748
Unigenes with SNPs:
22541
Mean SNPs per unigene:
3.6
SSRs statistics
Tot. SSRs:
8944
Mean SSRs per unigene:
1.2
SSRs di-nucl. :
3186
SSRs tri-nucl. :
3523
SSRs > tri-nucl. :
2235
Annotations statistics
Annotated unigenes:
54771
Descriptions:
32674
Gos:
2415
Interpros:
6131
ECs:
689
Keggs:
140
Project components
Assembly components:
Unigenes file:
hypothalamus_unigenes.fasta
ACE file:
hypothalamus.ace
Download annotations for specified unigenes:
SFFs:
File 1:
HD90K6R01.sff
File 2:
HD90K6R02.sff
SeqTrimNext reports:
File 1:
HD90K6R01_report.pdf
File 2:
HD90K6R02_report.pdf
IFAPA Centro El Toruño. Ctra. N. IV Km. 654a. Camino de Tiro Pichón. El Puerto de Santa María (Cádiz), Spain. Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29590 Campanillas (Málaga), Spain