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Assembly Name: Hypothalamus v1
General Information
Organism: Solea senegalensis
Tissue: Hypothalamus
Description: RNA from Solea senegalensis Hypothalamus tissue sequenced using 454 Titanium sequencing technologie.
Assembly Statistics
Number of used reads: 348799
Number of unigenes: 55469
Mean contig length: 269
SNPs statistics
Tot. SNPs: 82748
Unigenes with SNPs: 22541
Mean SNPs per unigene: 3.6
SSRs statistics
Tot. SSRs: 8944
Mean SSRs per unigene: 1.2
SSRs di-nucl. : 3186
SSRs tri-nucl. : 3523
SSRs > tri-nucl. : 2235
Annotations statistics
Annotated unigenes: 54771
Descriptions: 32674
Gos: 2415
Interpros: 6131
ECs: 689
Keggs: 140
Project components

Assembly components:

Unigenes file: hypothalamus_unigenes.fasta

ACE file: hypothalamus.ace



Download annotations for specified unigenes:

Paste your unigenes names list (one unigene per line):
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Or upload unigenes file with names list (one unigene per line):


SFFs:
File 1: HD90K6R01.sff

File 2: HD90K6R02.sff


SeqTrimNext reports:

File 1: HD90K6R01_report.pdf

File 2: HD90K6R02_report.pdf





Juntadeandalucia

IFAPA Centro El Toruño. Ctra. N. IV Km. 654a. Camino de Tiro Pichón. El Puerto de Santa María (Cádiz), Spain.
Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29590 Campanillas (Málaga), Spain