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Assembly Name: Hypothalamus v1

Listing Annotated UniGenes

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Help Complete | Putative Complete | N-terminus | Putative N-terminus | Internal | C-terminus | Putative C-terminus | Coding | Putative Coding | Putative ncRNA | Misassembled | Unknown


Search: Containing in

Name Length
SoftwareDescriptionE-value
FL-next Status Origin of reads
hypoth_v1_unigene55320 142
• AutoFact
None-
• FL-Next
None-
• Sma3
None-
unknown
hypoth_v1_unigene55321 330
• AutoFact
similar to leucine rich repeat transmembrane neuronal 1
3.0e-19
• FL-Next
tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
leucine rich repeat transmembrane neuronal 1
2.467e-10
Putative C-terminus
hypoth_v1_unigene55322 126
• AutoFact
Unassigned protein
2.0e-05
• FL-Next
tr=Uncharacterized protein; Dicentrarchus labrax (European seabass) (Morone labrax).
0.0
• Sma3
None-
Putative Complete
hypoth_v1_unigene55324 293
• AutoFact
MGC113045, tcf3a; zgc:113045; K09063 transcription factor 3/4/12
3.0e-27
• FL-Next
tr=E2A2 transcription factor; Oryzias latipes (Medaka fish) (Japanese ricefish).
0.0
• Sma3
transcription factor 12
6.54e-13
N-terminus
hypoth_v1_unigene55326 292
• AutoFact
UPI00016E8500 related cluster n=4 Tax=Takifugu rubripes RepID=UPI00016E8500
4.0e-39
• FL-Next
tr=Hydroxymethylglutaryl-coa lyase, mitochondrial; Salmo salar (Atlantic salmon).
0.0
• Sma3
3-hydroxymethyl-3-methylglutaryl-coa lyase-like 1
3.784e-10
Internal
hypoth_v1_unigene55327 339
• AutoFact
RPE-retinal G protein-coupled receptor n=1 Tax=Dicentrarchus labrax RepID=E6ZHK6_DICLA
0.0
• FL-Next
tr=RPE-retinal G protein-coupled receptor; Dicentrarchus labrax (European seabass) (Morone labrax).
0.0
• Sma3
None-
Internal
hypoth_v1_unigene55335 74
• AutoFact
SelP_N multi-domain protein
2.0e-05
• FL-Next
None-
• Sma3
None-
unknown
hypoth_v1_unigene55336 30
• AutoFact
Unassigned protein
2.0e-05
• FL-Next
None-
• Sma3
None-
unknown
hypoth_v1_unigene55344 147
• AutoFact
cop9 signalosome complex subunit 6 n=28 Tax=Euteleostomi RepID=CSN6_HUMAN
3.0e-18
• FL-Next
tr=cop9 signalosome complex subunit 6; Anoplopoma fimbria (Sablefish).
0.0
• Sma3
cop9 constitutive photomorphogenic homolog subunit 6 (Arabidopsis)
2.384e-11
Internal
hypoth_v1_unigene55348 153
• AutoFact
PREDICTED: similar to ubiquitin B precursor n=1 Tax=Canis lupus familiaris RepID=UPI00005A0C9F
4.0e-17
• FL-Next
tr=ubiquitin; Salmo salar (Atlantic salmon).
0.0
• Sma3
ubiquitin
6.338e-10
N-terminus
hypoth_v1_unigene55355 276
• AutoFact
dynactin subunit 2 n=1 Tax=Salmo salar RepID=B5X3R2_SALSA
1.0e-16
• FL-Next
tr=dynactin subunit 2; Dicentrarchus labrax (European seabass) (Morone labrax).
0.0
• Sma3
dynactin subunit 2
1.085e-19
Internal
hypoth_v1_unigene55356 288
• AutoFact
similar to calcium channel, voltage-dependent, L type, alpha 1C subunit; K04850 voltage-dependent calcium channel L type alpha-1C
1.0e-07
• FL-Next
tr=M-phase phosphoprotein 6; Salmo salar (Atlantic salmon).
0.0
• Sma3
voltage-dependent L-type calcium channel subunit alpha-1S
4.651e-14
Internal
hypoth_v1_unigene55365 269
• AutoFact
PREDICTED: tubulin alpha-1D chain-like n=2 Tax=Deuterostomia RepID=UPI00020F72DE
3.00004e-41
• FL-Next
tr=Tuba8l4 protein; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
tubulin, alpha 4
5.319e-09
Internal
hypoth_v1_unigene55366 132
• AutoFact
stx12, zgc:86632; syntaxin 12; K13813 syntaxin 12/13
2.0e-10
• FL-Next
tr=syntaxin 12; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
syntaxin 12
4.126e-10
Internal
hypoth_v1_unigene55369 263
• AutoFact
PREDICTED: cellular nucleic acid-binding protein n=1 Tax=Danio rerio RepID=UPI000175FE57
2.00386e-43
• FL-Next
tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
cellular nucleic acid-binding protein
7.929e-26
C-terminus
hypoth_v1_unigene55372 173
• AutoFact
Mov34 domain containing protein
7.0e-08
• FL-Next
tr=Chromosome 8 SCAF15119, whole genome shotgun sequence; Tetraodon nigroviridis (Green puffer).
0.0
• Sma3
Eukaryotic translation initiation factor 3 subunit H
4.298e-23
N-terminus
hypoth_v1_unigene55375 135
• AutoFact
mef2d, MGC145245, XMEF2D, sl-1, sl1; myocyte enhancer factor 2D; K09262 MADS-box transcription enhancer factor 2D
3.0e-18
• FL-Next
tr=Mef2d protein; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
myocyte enhancer factor 2D
3.665e-09
Internal
hypoth_v1_unigene55380 308
• AutoFact
btg3 n=3 Tax=Salmoninae RepID=B5XCC2_SALSA
2.0e-22
• FL-Next
tr=B-cell translocation gene 3; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
btg3 protein
9.131e-12
N-terminus
hypoth_v1_unigene55381 147
• AutoFact
cytosolic 5'-nucleotidase iii n=1 Tax=Ictalurus punctatus RepID=E3TGJ8_ICTPU
2.0e-10
• FL-Next
tr=cytosolic 5'-nucleotidase iii; Ictalurus punctatus (Channel catfish).
0.0
• Sma3
cytosolic 5'-nucleotidase iii
2.207e-15
Internal
hypoth_v1_unigene55391 100
• AutoFact
Ubiquitin carrier protein n=1 Tax=Tetraodon nigroviridis RepID=Q4RHR3_TETNG
4.0e-10
• FL-Next
tr=Chromosome 19 SCAF15045, whole genome shotgun sequence; Tetraodon nigroviridis (Green puffer).
0.0
• Sma3
None-
Putative N-terminus


Juntadeandalucia

IFAPA Centro El Toruño. Ctra. N. IV Km. 654a. Camino de Tiro Pichón. El Puerto de Santa María (Cádiz), Spain.
Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29590 Campanillas (Málaga), Spain