Logo_sudoe_cb Cabecera_solea2 Img_right
HomeAssembliesBLASTSearchInstitutions

Assembly Name: Hypothalamus v1

Listing Annotated UniGenes

All unigenes | Annotated unigenes | Download Annotated sequences Help

Help Complete | Putative Complete | N-terminus | Putative N-terminus | Internal | C-terminus | Putative C-terminus | Coding | Putative Coding | Putative ncRNA | Misassembled | Unknown


Search: Containing in

Name Length
SoftwareDescriptionE-value
FL-next Status Origin of reads
hypoth_v1_unigene225 709
• AutoFact
Unassigned protein
0.0
• FL-Next
tr=Chromosome 13 SCAF15000, whole genome shotgun sequence; Tetraodon nigroviridis (Green puffer).
0.0
• Sma3
TBP-associated factor 3
2.056e-10
Internal
hypoth_v1_unigene227 960
• AutoFact
Proteasome subunit alpha type-7 n=19 Tax=Euteleostomi RepID=PSA7_CARAU
0.0
• FL-Next
sp=Proteasome subunit alpha type; Osmerus mordax (Rainbow smelt) (Atherina mordax).
0.0
• Sma3
None-
C-terminus
hypoth_v1_unigene228 336
• AutoFact
selenoprotein w2a n=1 Tax=Oreochromis mossambicus RepID=Q3ZLC7_OREMO
8.0e-30
• FL-Next
tr=selenoprotein w2a; Oreochromis mossambicus (Mozambique tilapia) (Tilapia mossambica).
0.0
• Sma3
selenoprotein w2a
0.0
Putative Complete
hypoth_v1_unigene229 426
• AutoFact
mrpl46; mitochondrial ribosomal protein l46
5.0e-15
• FL-Next
tr=39S ribosomal protein l46, mitochondrial; Salmo salar (Atlantic salmon).
0.0
• Sma3
39S ribosomal protein l46, mitochondrial
5.195e-11
N-terminus
hypoth_v1_unigene230 456
• AutoFact
GABA receptor rho-1 subunit n=6 Tax=Percomorpha RepID=Q8UW04_TAKRU
7.0e-31
• FL-Next
tr=Gamma-aminobutyric-acid receptor rho-1A subunit; Morone americana (White perch) (Roccus americanus).
0.0
• Sma3
None-
C-terminus
hypoth_v1_unigene231 649
• AutoFact
sorting nexin-9 (Fragment) n=1 Tax=Perca flavescens RepID=F1C718_PERFV
0.0
• FL-Next
tr=sorting nexin-9; Salmo salar (Atlantic salmon).
0.0
• Sma3
sorting nexin-9
4.347e-10
C-terminus
hypoth_v1_unigene234 816
• AutoFact
Mitotic-spindle organizing protein 1 n=2 Tax=Otophysi RepID=MZT1_DANRE
3.0e-22
• FL-Next
sp=Mitotic-spindle organizing protein 1; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
Uncharacterized protein
0.0
Complete
hypoth_v1_unigene235 719
• AutoFact
CTD small phosphatase-like protein 2-A n=1 Tax=Danio rerio RepID=CTL2A_DANRE
0.0
• FL-Next
sp=CTD small phosphatase-like protein 2-A; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 2
5.765e-14
Internal
hypoth_v1_unigene236 581
• AutoFact
tspan5, MGC145322, net-4, net4, tm4sf9, tspan-5; tetraspanin 5
0.0
• FL-Next
tr=Zgc:103404; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
tetraspanin-14
2.17e-09
C-terminus
hypoth_v1_unigene237 736
• AutoFact
acaa2, fb59b11, wu:fb59b11, zgc:56036; acetyl-coa acyltransferase 2 (EC:2.3.1.16); K07508 acetyl-coa acyltransferase 2 [EC:2.3.1.16]
0.0
• FL-Next
tr=Zgc:56036; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
acetyl-coa acetyltransferase 2
1.298e-15
C-terminus
hypoth_v1_unigene238 587
• AutoFact
pgm2, MGC77113, zgc:77113; phosphoglucomutase 2 (EC:5.4.2.2); K01835 phosphoglucomutase [EC:5.4.2.2]
0.0
• FL-Next
tr=Chromosome undetermined SCAF12036, whole genome shotgun sequence; Tetraodon nigroviridis (Green puffer).
0.0
• Sma3
phosphoglucomutase 2
1.643e-13
Internal
hypoth_v1_unigene239 698
• AutoFact
argininosuccinate synthase (Fragment) n=4 Tax=Tetraodontidae RepID=Q4SJK9_TETNG
0.0
• FL-Next
sp=argininosuccinate synthase; Salmo salar (Atlantic salmon).
0.0
• Sma3
argininosuccinate synthase
1.464e-21
Internal
hypoth_v1_unigene242 594
• AutoFact
ptk6b, MGC153964, zgc:153964; PTK6 protein tyrosine kinase 6b; K08894 PTK6 protein tyrosine kinase 6 [EC:2.7.10.2]
0.0
• FL-Next
tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
V-yes-1 Yamaguchi sarcoma viral related oncogene homolog
5.753e-14
C-terminus
hypoth_v1_unigene243 407
• AutoFact
zinc finger ccch domain-containing protein 15 n=1 Tax=Xenopus laevis RepID=ZC3HF_XENLA
4.99983e-42
• FL-Next
tr=zinc finger ccch domain-containing protein 15; Salmo salar (Atlantic salmon).
0.0
• Sma3
zinc finger ccch domain-containing protein 15
3.167e-28
Internal
hypoth_v1_unigene244 554
• AutoFact
ZNF184; zinc finger protein 184
2.0e-11
• FL-Next
tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
None-
C-terminus
hypoth_v1_unigene248 1109
• AutoFact
Hid1 multi-domain protein
0.0
• FL-Next
tr=Zgc:100980; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
Zgc:100980
5.89e-06
C-terminus
hypoth_v1_unigene254 691
• AutoFact
wu:fk56c04, zgc:154030; si:ch211-195b13.1
0.0
• FL-Next
tr=Serine/threonine-protein kinase Sgk1; Salmo salar (Atlantic salmon).
0.0
• Sma3
Ribosomal protein S6 kinase
0.0
Putative C-terminus
hypoth_v1_unigene256 454
• AutoFact
HSPC038 protein n=7 Tax=Euteleostomi RepID=Q6TGY0_DANRE
8.0e-06
• FL-Next
tr=HSPC038 protein; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
Zgc:92624 protein
3.72e-06
C-terminus
hypoth_v1_unigene257 271
• AutoFact
wu:fb11c11; zgc:109957
2.0e-10
• FL-Next
tr=Chromosome 9 SCAF14729, whole genome shotgun sequence; Tetraodon nigroviridis (Green puffer).
0.0
• Sma3
Nuclear protein Hcc-1
2.90069e-43
N-terminus
hypoth_v1_unigene260 769
• AutoFact
SUMO2; SMT3 suppressor of mif two 3 homolog 2 (S. cerevisiae); K12160 small ubiquitin-related modifier
0.0
• FL-Next
tr=small ubiquitin-related modifier 4; Oryzias latipes (Medaka fish) (Japanese ricefish).
0.0
• Sma3
small ubiquitin-related modifier 4
0.0
Complete


Juntadeandalucia

IFAPA Centro El Toruño. Ctra. N. IV Km. 654a. Camino de Tiro Pichón. El Puerto de Santa María (Cádiz), Spain.
Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29590 Campanillas (Málaga), Spain