Logo_sudoe_cb Cabecera_solea2 Img_right
HomeAssembliesBLASTSearchInstitutions

Assembly Name: Hypothalamus v1

Listing Annotated UniGenes

All unigenes | Annotated unigenes | Download Annotated sequences Help

Help Complete | Putative Complete | N-terminus | Putative N-terminus | Internal | C-terminus | Putative C-terminus | Coding | Putative Coding | Putative ncRNA | Misassembled | Unknown


Search: Containing in

Name Length
SoftwareDescriptionE-value
FL-next Status Origin of reads
hypoth_v1_unigene161 802
• AutoFact
MGC56106, smap; zgc:56106
0.0
• FL-Next
sp=Small acidic protein; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
Small acidic protein
1.073e-30
Complete
hypoth_v1_unigene163 275
• AutoFact
scaper; S phase cyclin A-associated protein in the ER
2.0e-21
• FL-Next
tr=Scaper protein; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
S phase cyclin A-associated protein in the ER
1.951e-11
C-terminus
hypoth_v1_unigene164 1174
• AutoFact
apolipoprotein A-I n=1 Tax=Rachycentron canadum RepID=D3U1R9_9PERC
0.0
• FL-Next
tr=apolipoprotein A-I; Rachycentron canadum (cobia).
0.0
• Sma3
apolipoprotein A-I
0.0
Complete
hypoth_v1_unigene166 1262
• AutoFact
Putative ferric-chelate reductase 1 n=1 Tax=Danio rerio RepID=FRRS1_DANRE
0.0
• FL-Next
sp=Putative ferric-chelate reductase 1; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
None-
C-terminus
hypoth_v1_unigene167 676
• AutoFact
lsm8 homolog, U6 small nuclear RNA associated (S. cerevisiae); K12627 U6 snrna-associated Sm-like protein lsm8
1.00053e-42
• FL-Next
tr=U6 snrna-associated Sm-like protein lsm8; Salmo salar (Atlantic salmon).
0.0
• Sma3
U6 snrna-associated Sm-like protein lsm8
0.0
Complete
hypoth_v1_unigene168 896
• AutoFact
mrpl9, im:6902315, si:ch211-210h11.9, wu:fa98b03; mitochondrial ribosomal protein L9
0.0
• FL-Next
tr=39S ribosomal protein L9, mitochondrial; Salmo salar (Atlantic salmon).
0.0
• Sma3
39S ribosomal protein L9, mitochondrial
1.7e-15
C-terminus
hypoth_v1_unigene169 995
• AutoFact
Unassigned protein
0.0
• FL-Next
tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
Scc2-2B
9.146e-06
Internal
hypoth_v1_unigene170 902
• AutoFact
zf-CCCH domain containing protein
0.0001
• FL-Next
tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
Si:ch211-113e8.11
2.015e-06
Putative Complete
hypoth_v1_unigene172 515
• AutoFact
Isoform 2 of ptb domain-containing engulfment adapter protein 1 n=1 Tax=Danio rerio RepID=Q32PV0-2
1.0e-33
• FL-Next
tr=ptb domain-containing engulfment adapter protein 1; Anoplopoma fimbria (Sablefish).
0.0
• Sma3
ptb domain-containing engulfment adapter protein 1
6.195e-15
C-terminus
hypoth_v1_unigene173 754
• AutoFact
PRMT5 n=1 Tax=Oryzias latipes RepID=B1A4A0_ORYLA
0.0
• FL-Next
tr=PRMT5; Oryzias latipes (Medaka fish) (Japanese ricefish).
0.0
• Sma3
Protein arginine methyltransferase 5
2.906e-10
C-terminus
hypoth_v1_unigene174 714
• AutoFact
st6galnac3, fb68h09, siat7c, wu:fb67c12, wu:fb68h09, zgc:73301; ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1, 3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3; K03373 N-acetylgalactosaminide alpha-2,6-sialyltransferase (sialyltransferase 7
0.0
• FL-Next
tr=alpha-2,6-sialyltransferase; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
alpha-2,6-sialyltransferase
3.002e-30
C-terminus
hypoth_v1_unigene175 591
• AutoFact
Zgc:175108 protein n=2 Tax=Danio rerio RepID=A9JTF7_DANRE
9.0e-21
• FL-Next
tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
Family with sequence similarity 5, member B
8.659e-10
C-terminus
hypoth_v1_unigene176 924
• AutoFact
proto-oncogene protein c-fos (Fragment) n=1 Tax=Epinephelus coioides RepID=D6PVU3_EPICO
9.80909e-45
• FL-Next
tr=proto-oncogene protein c-fos; Dicentrarchus labrax (European seabass) (Morone labrax).
0.0
• Sma3
proto-oncogene protein c-fos
0.0
C-terminus
hypoth_v1_unigene177 554
• AutoFact
Metalloprotease atp23 n=2 Tax=Salmo salar RepID=B5X8D8_SALSA
0.0
• FL-Next
tr=Metalloprotease atp23; Salmo salar (Atlantic salmon).
0.0
• Sma3
Mitochondrial inner membrane protease atp23 homolog
9.761e-16
C-terminus
hypoth_v1_unigene179 558
• AutoFact
Unassigned protein
0.0
• FL-Next
tr=Protein fam59a; Dicentrarchus labrax (European seabass) (Morone labrax).
0.0
• Sma3
Protein fam59a
1.514e-11
Internal
hypoth_v1_unigene181 835
• AutoFact
mgc97656 protein. n=1 Tax=Xenopus (Silurana) tropicalis RepID=UPI0002067FAE
0.0
• FL-Next
sp=COP9 signalosome complex subunit 2; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
mgc97656 protein
9.146e-06
C-terminus
hypoth_v1_unigene183 482
• AutoFact
Nogo receptor homolog 2a n=3 Tax=Danio rerio RepID=Q6WZD2_DANRE
2.0e-08
• FL-Next
tr=Nogo receptor homolog 2a; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
None-
C-terminus
hypoth_v1_unigene185 268
• AutoFact
Cathepsin D n=2 Tax=Percoidei RepID=A8D8H8_LATCA
3.0e-05
• FL-Next
tr=Cathepsin D; Lates calcarifer (Barramundi).
0.0
• Sma3
None-
N-terminus
hypoth_v1_unigene186 415
• AutoFact
tryptophanyl-trna synthetase n=2 Tax=Danio rerio RepID=Q5RL11_DANRE
0.0
• FL-Next
tr=tryptophanyl-trna synthetase; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
tryptophanyl-trna synthetase
9.788e-14
C-terminus
hypoth_v1_unigene187 347
• AutoFact
coatomer subunit epsilon n=7 Tax=Euteleostei RepID=C1BG73_ONCMY
1.96182e-44
• FL-Next
tr=coatomer subunit epsilon; Esox lucius (Northern pike).
0.0
• Sma3
coatomer subunit epsilon
2.4e-19
N-terminus


Juntadeandalucia

IFAPA Centro El Toruño. Ctra. N. IV Km. 654a. Camino de Tiro Pichón. El Puerto de Santa María (Cádiz), Spain.
Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29590 Campanillas (Málaga), Spain