Logo_sudoe_cb Cabecera_solea2 Img_right
HomeAssembliesBLASTSearchInstitutions

Assembly Name: Hypothalamus v1

Listing Internal UniGenes

All unigenes | Annotated unigenes | Download Internal sequences Help

Help Complete | Putative Complete | N-terminus | Putative N-terminus | Internal | C-terminus | Putative C-terminus | Coding | Putative Coding | Putative ncRNA | Misassembled | Unknown


Search: Containing in

Name Length
SoftwareDescriptionE-value
FL-next Status Origin of reads
hypoth_v1_unigene16 1219
• AutoFact
tbrg4; transforming growth factor beta regulator 4
3.0e-37
• FL-Next
tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
Nascent polypeptide-associated complex subunit alpha
1.592e-19
Internal
hypoth_v1_unigene18 1005
• AutoFact
Peptidylprolyl isomerase (cyclophilin)-like 2 n=2 Tax=Danio rerio RepID=Q6IQJ6_DANRE
0.0
• FL-Next
tr=Peptidylprolyl isomerase (cyclophilin)-like 2; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
Peptidyl-prolyl cis-trans isomerase
0.0
Internal
hypoth_v1_unigene47 651
• AutoFact
PREDICTED: similar to tubulin, beta, 2 isoform 2 n=1 Tax=Canis lupus familiaris RepID=UPI00005A1E34
0.0
• FL-Next
tr=Zgc:123194; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
tubulin beta-6 chain
4.108e-09
Internal
hypoth_v1_unigene58 511
• AutoFact
Heme-regulated initiation factor 2 alpha kinase n=1 Tax=Paralichthys olivaceus RepID=Q3HUN9_PAROL
0.0
• FL-Next
tr=Heme-regulated initiation factor 2 alpha kinase; Paralichthys olivaceus (Japanese flounder) (Hippoglossus olivaceus).
0.0
• Sma3
Eukaryotic translation initiation factor 2-alpha kinase 1
7.995e-14
Internal
hypoth_v1_unigene79 594
• AutoFact
similar to transcription factor 20
5.0e-06
• FL-Next
tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
None-
Internal
hypoth_v1_unigene84 673
• AutoFact
cytosolic nonspecific dipeptidase n=4 Tax=Percomorpha RepID=Q3LFW5_ORENI
0.0
• FL-Next
tr=cytosolic nonspecific dipeptidase; Oreochromis niloticus (Nile tilapia) (Tilapia nilotica).
0.0
• Sma3
cytosolic nonspecific dipeptidase
1.65e-26
Internal
hypoth_v1_unigene89 860
• AutoFact
valyl-trna synthetase n=1 Tax=Takifugu rubripes RepID=SYVC_TAKRU
0.0
• FL-Next
tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
valyl-trna synthetase
1.562e-13
Internal
hypoth_v1_unigene109 667
• AutoFact
cGMP-dependent protein kinase I alpha n=1 Tax=Oryzias latipes RepID=Q75PY4_ORYLA
0.0
• FL-Next
tr=Chromosome 17 SCAF14563, whole genome shotgun sequence; Tetraodon nigroviridis (Green puffer).
0.0
• Sma3
Ribosomal protein S6 kinase
0.0
Internal
hypoth_v1_unigene122 658
• AutoFact
Transmembrane protein 49 n=2 Tax=Salmo salar RepID=B5XF32_SALSA
0.0
• FL-Next
tr=Chromosome undetermined SCAF7707, whole genome shotgun sequence; Tetraodon nigroviridis (Green puffer).
0.0
• Sma3
Vacuole membrane protein 1
5.863e-15
Internal
hypoth_v1_unigene126 452
• AutoFact
ubfd1, MGC162578, im:6905175, zgc:162578; ubiquitin family domain containing 1
0.0
• FL-Next
tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
Protein LOC562437-like
7.285e-06
Internal
hypoth_v1_unigene137 719
• AutoFact
Anoctamin domain containing protein
3.99931e-42
• FL-Next
tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
Uncharacterized protein
5.108e-19
Internal
hypoth_v1_unigene141 602
• AutoFact
PREDICTED: similar to soluble guanylate cyclase 1 beta 3 n=1 Tax=Gallus gallus RepID=UPI0000E80339
0.0
• FL-Next
tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
guanylate cyclase
0.0
Internal
hypoth_v1_unigene150 719
• AutoFact
Unassigned protein
0.0
• FL-Next
sp=Secernin-2; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
Secernin-2
7.629e-15
Internal
hypoth_v1_unigene160 721
• AutoFact
fcho2, MGC112167, cb304, sb:cb304, wu:fa01a02, zgc:112167; FCH domain only 2
0.0
• FL-Next
tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
Novel protein (zgc:112167)
3.261e-10
Internal
hypoth_v1_unigene169 995
• AutoFact
Unassigned protein
0.0
• FL-Next
tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
Scc2-2B
9.146e-06
Internal
hypoth_v1_unigene179 558
• AutoFact
Unassigned protein
0.0
• FL-Next
tr=Protein fam59a; Dicentrarchus labrax (European seabass) (Morone labrax).
0.0
• Sma3
Protein fam59a
1.514e-11
Internal
hypoth_v1_unigene198 824
• AutoFact
Serine/threonine-protein kinase osr1 n=4 Tax=Percomorpha RepID=E6ZIW2_DICLA
0.0
• FL-Next
tr=Serine/threonine-protein kinase osr1; Dicentrarchus labrax (European seabass) (Morone labrax).
0.0
• Sma3
None-
Internal
hypoth_v1_unigene215 890
• AutoFact
map1b; microtubule-associated protein 1B; K10429 microtubule-associated protein 1
0.0
• FL-Next
tr=Chromosome 4 SCAF14533, whole genome shotgun sequence; Tetraodon nigroviridis (Green puffer).
0.0
• Sma3
Uncharacterized protein
6.595e-13
Internal
hypoth_v1_unigene218 651
• AutoFact
ppm1f; protein phosphatase 1F (pp2c domain containing); K01090 protein phosphatase [EC:3.1.3.16]
0.0
• FL-Next
tr=Novel protein similar to vertebrate protein phosphatase 1F (pp2c domain containing) (ppm1f); Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
None-
Internal
hypoth_v1_unigene220 383
• AutoFact
cartilage acidic protein 2 n=3 Tax=Takifugu rubripes RepID=A1XF88_TAKRU
7.00649e-45
• FL-Next
tr=cartilage acidic protein 2; Takifugu rubripes (Japanese pufferfish) (Fugu rubripes).
0.0
• Sma3
cartilage acidic protein 2
7.698e-34
Internal


Juntadeandalucia

IFAPA Centro El Toruño. Ctra. N. IV Km. 654a. Camino de Tiro Pichón. El Puerto de Santa María (Cádiz), Spain.
Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29590 Campanillas (Málaga), Spain