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Assembly Name: Hypothalamus v1

Listing Internal UniGenes

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Help Complete | Putative Complete | N-terminus | Putative N-terminus | Internal | C-terminus | Putative C-terminus | Coding | Putative Coding | Putative ncRNA | Misassembled | Unknown


Search: Containing in

Name Length
SoftwareDescriptionE-value
FL-next Status Origin of reads
hypoth_v1_unigene1062 806
• AutoFact
MAP2_projctn domain containing protein
3.0e-24
• FL-Next
tr=Chromosome 2 SCAF15004, whole genome shotgun sequence; Tetraodon nigroviridis (Green puffer).
0.0
• Sma3
None-
Internal
hypoth_v1_unigene1073 774
• AutoFact
developmentally regulated gtp binding protein 2 n=6 Tax=Clupeocephala RepID=Q6TH20_DANRE
0.0
• FL-Next
tr=developmentally regulated gtp-binding protein 2; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
developmentally-regulated gtp-binding protein 2
2.934e-10
Internal
hypoth_v1_unigene1089 948
• AutoFact
UPF0066 domain containing protein
3.0e-39
• FL-Next
tr=Chromosome 18 SCAF14665, whole genome shotgun sequence; Tetraodon nigroviridis (Green puffer).
0.0
• Sma3
Putative uncharacterized protein LOC549177
5.735e-06
Internal
hypoth_v1_unigene1099 277
• AutoFact
lrrtm1, FLJ12568, im:6904481; leucine rich repeat transmembrane neuronal 1
4.0e-38
• FL-Next
tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
leucine rich repeat transmembrane neuronal 1
2.869e-09
Internal
hypoth_v1_unigene1102 326
• AutoFact
PREDICTED: mam domain-containing glycosylphosphatidylinositol anchor protein 2-like, partial n=2 Tax=Danio rerio RepID=UPI0002027D3C
9.0e-07
• FL-Next
tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
mam domain containing glycosylphosphatidylinositol anchor 2
7.75e-06
Internal
hypoth_v1_unigene1107 435
• AutoFact
abcc2, MGC66072, zgc:66072; ATP-binding cassette, sub-family C (CFTR/MRP), member 2; K05666 ATP-binding cassette, subfamily C (CFTR/MRP), member 2
8.0e-30
• FL-Next
tr=Multidrug resistance associated protein 2; Oncorhynchus mykiss (Rainbow trout) (Salmo gairdneri).
0.0
• Sma3
Multidrug resistance-associated protein member 2
9.921e-06
Internal
hypoth_v1_unigene1119 404
• AutoFact
MGC136784, Ngrn, zgc:136784; si:ch211-199o1.5
7.0e-30
• FL-Next
tr=Chromosome 9 SCAF14991, whole genome shotgun sequence; Tetraodon nigroviridis (Green puffer).
0.0
• Sma3
Si:ch211-199o1.5 protein
3.565e-06
Internal
hypoth_v1_unigene1137 531
• AutoFact
elongation factor Ts, mitochondrial n=1 Tax=Salmo salar RepID=EFTS_SALSA
0.0
• FL-Next
sp=elongation factor Ts, mitochondrial; Salmo salar (Atlantic salmon).
0.0
• Sma3
elongation factor Ts, mitochondrial
3.614e-15
Internal
hypoth_v1_unigene1139 181
• AutoFact
Unassigned protein
3.0e-05
• FL-Next
tr=Chromosome 18 SCAF14786, whole genome shotgun sequence; Tetraodon nigroviridis (Green puffer).
0.0
• Sma3
None-
Internal
hypoth_v1_unigene1175 342
• AutoFact
efemp2, wu:fb22f10, wu:fc49d09, zgc:103659; EGF-containing fibulin-like extracellular matrix protein 2
0.0
• FL-Next
tr=EGF-containing fibulin-like extracellular matrix protein 2; Salmo salar (Atlantic salmon).
0.0
• Sma3
fibulin-1
8.979e-12
Internal
hypoth_v1_unigene1176 421
• AutoFact
Macrophage mannose receptor 1 n=1 Tax=Dicentrarchus labrax RepID=E6ZJ33_DICLA
0.0
• FL-Next
tr=Macrophage mannose receptor 1; Dicentrarchus labrax (European seabass) (Morone labrax).
0.0
• Sma3
mannose receptor, C type 1a
9.921e-06
Internal
hypoth_v1_unigene1188 361
• AutoFact
U2-associated protein sr140 n=4 Tax=Percomorpha RepID=E6ZIY5_DICLA
3.0e-26
• FL-Next
tr=U2-associated protein sr140; Dicentrarchus labrax (European seabass) (Morone labrax).
0.0
• Sma3
Si:dkey-181m9.9
5.904e-10
Internal
hypoth_v1_unigene1194 234
• AutoFact
ras-related gtp binding C n=4 Tax=Otophysi RepID=A8KBK8_DANRE
2.0e-35
• FL-Next
tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
ras-related gtp binding C
1.857e-09
Internal
hypoth_v1_unigene1246 378
• AutoFact
api5, api5l1, sr:nyz021, wu:fb26c03, zgc:66211; apoptosis inhibitor 5
0.0
• FL-Next
tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
apoptosis inhibitor 5
3.229e-22
Internal
hypoth_v1_unigene1259 347
• AutoFact
NADH dehydrogenase 1 beta subcomplex subunit 4 n=1 Tax=Dicentrarchus labrax RepID=E6ZIJ4_DICLA
3.9937e-43
• FL-Next
tr=NADH dehydrogenase 1 beta subcomplex subunit 4; Dicentrarchus labrax (European seabass) (Morone labrax).
0.0
• Sma3
Uncharacterized protein
0.0
Internal
hypoth_v1_unigene1274 171
• AutoFact
vitamin K epoxide reductase complex subunit 1-like protein 1 n=2 Tax=Percomorpha RepID=C3KIF5_ANOFI
6.0e-11
• FL-Next
tr=vitamin K epoxide reductase complex subunit 1-like protein 1; Anoplopoma fimbria (Sablefish).
0.0
• Sma3
vitamin K epoxide reductase complex subunit 1-like protein 1
2.206e-11
Internal
hypoth_v1_unigene1276 1018
• AutoFact
waca, wac, wu:fc13f04, wu:fj68f01, zgc:55755; WW domain containing adaptor with coiled-coil a
3.0e-28
• FL-Next
tr=Chromosome 15 SCAF14542, whole genome shotgun sequence; Tetraodon nigroviridis (Green puffer).
0.0
• Sma3
WW domain containing adaptor with coiled-coil b
1.557e-10
Internal
hypoth_v1_unigene1283 300
• AutoFact
PREDICTED: ankyrin repeat domain-containing protein 11 n=1 Tax=Danio rerio RepID=UPI000175FAED
4.99997e-41
• FL-Next
tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
None-
Internal
hypoth_v1_unigene1287 374
• AutoFact
sfpq, hm:zeh0027, wu:fa11h12, wu:fd10f03, zgc:85935; splicing factor proline/glutamine rich (polypyrimidine tract binding protein associated); K13219 splicing factor, proline- and glutamine-rich
3.0e-11
• FL-Next
tr=Splicing factor proline/glutamine rich (polypyrimidine tract binding protein associated); Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
Non-POU domain containing, octamer-binding
3.949e-09
Internal
hypoth_v1_unigene1297 601
• AutoFact
MGC110034, mrpl4; zgc:110034
0.0
• FL-Next
tr=Mitochondrial 39s ribosomal protein L4; Esox lucius (Northern pike).
0.0
• Sma3
Mitochondrial 39s ribosomal protein L4
5.093e-15
Internal


Juntadeandalucia

IFAPA Centro El Toruño. Ctra. N. IV Km. 654a. Camino de Tiro Pichón. El Puerto de Santa María (Cádiz), Spain.
Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29590 Campanillas (Málaga), Spain