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Assembly Name: Hypothalamus v1

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Help Complete | Putative Complete | N-terminus | Putative N-terminus | Internal | C-terminus | Putative C-terminus | Coding | Putative Coding | Putative ncRNA | Misassembled | Unknown


Search: Containing in

Name Length
SoftwareDescriptionE-value
FL-next Status Origin of reads
hypoth_v1_unigene1 1399
• AutoFact
GH10578 n=1 Tax=Drosophila grimshawi RepID=B4JDB6_DROGR
3.0e-07
• FL-Next
None-
• Sma3
Uncharacterized protein
0.0
Coding
hypoth_v1_unigene2 949
• AutoFact
ubiquitin carboxyl-terminal hydrolase n=2 Tax=Tetraodontidae RepID=Q4SLR1_TETNG
0.0
• FL-Next
sp=ubiquitin carboxyl-terminal hydrolase; Tetraodon nigroviridis (Green puffer).
0.0
• Sma3
ubiquitin carboxyl-terminal hydrolase
1.701e-20
C-terminus
hypoth_v1_unigene3 857
• AutoFact
26s proteasome non-atpase regulatory subunit 4 n=2 Tax=Salmo salar RepID=B5XDF9_SALSA
0.0
• FL-Next
tr=26s proteasome non-atpase regulatory subunit 4; Salmo salar (Atlantic salmon).
0.0
• Sma3
26s proteasome subunit
3.505e-15
C-terminus
hypoth_v1_unigene4 1027
• AutoFact
med6, wu:fa14c11, zgc:86933; mediator complex subunit 6
0.0
• FL-Next
sp=mediator of RNA polymerase II transcription subunit 6; Osmerus mordax (Rainbow smelt) (Atherina mordax).
0.0
• Sma3
mediator complex subunit 6
0.0
Complete
hypoth_v1_unigene5 648
• AutoFact
None-
• FL-Next
None-
• Sma3
None-
unknown
hypoth_v1_unigene6 865
• AutoFact
None-
• FL-Next
None-
• Sma3
None-
unknown
hypoth_v1_unigene7 619
• AutoFact
None-
• FL-Next
None-
• Sma3
None-
unknown
hypoth_v1_unigene8 1092
• AutoFact
Creatine kinase n=1 Tax=Fundulus heteroclitus RepID=A2Q010_FUNHE
0.0
• FL-Next
tr=Creatine kinase; Fundulus heteroclitus (Killifish) (Mummichog).
0.0
• Sma3
Uncharacterized protein
0.0
C-terminus
hypoth_v1_unigene9 788
• AutoFact
None-
• FL-Next
None-
• Sma3
None-
unknown
hypoth_v1_unigene10 929
• AutoFact
vacuolar protein sorting-associated protein 41 homolog n=1 Tax=Salmo salar RepID=C0H9Z5_SALSA
0.0
• FL-Next
tr=vacuolar protein sorting-associated protein 41 homolog; Salmo salar (Atlantic salmon).
0.0
• Sma3
vacuolar protein sorting-associated protein 41 homolog
6.276e-15
Putative C-terminus
hypoth_v1_unigene11 690
• AutoFact
None-
• FL-Next
None-
• Sma3
None-
unknown
hypoth_v1_unigene12 819
• AutoFact
similar to X-box binding protein 1; K09027 X box-binding protein 1
8.0e-24
• FL-Next
tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
X-box binding protein 1B-like protein
7.75e-06
C-terminus
hypoth_v1_unigene13 653
• AutoFact
None-
• FL-Next
None-
• Sma3
None-
unknown
hypoth_v1_unigene14 844
• AutoFact
DUF3585 multi-domain protein
1.0e-22
• FL-Next
tr=Novel protein; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
Microtubule associated monoxygenase, calponin and LIM domain containing 3b
7.81e-15
C-terminus
hypoth_v1_unigene15 768
• AutoFact
Arf-GAP with dual PH domain-containing protein 1 n=4 Tax=Percomorpha RepID=E6ZGK1_DICLA
5.0e-33
• FL-Next
tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
None-
C-terminus
hypoth_v1_unigene16 1219
• AutoFact
tbrg4; transforming growth factor beta regulator 4
3.0e-37
• FL-Next
tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
Nascent polypeptide-associated complex subunit alpha
1.592e-19
Internal
hypoth_v1_unigene17 614
• AutoFact
transmembrane and ubiquitin-like domain-containing protein 2 n=1 Tax=Salmo salar RepID=B5X3V1_SALSA
7.0e-22
• FL-Next
tr=transmembrane and ubiquitin-like domain-containing protein 2; Salmo salar (Atlantic salmon).
0.0
• Sma3
transmembrane and ubiquitin-like domain containing 2
1.626e-10
C-terminus
hypoth_v1_unigene18 1005
• AutoFact
Peptidylprolyl isomerase (cyclophilin)-like 2 n=2 Tax=Danio rerio RepID=Q6IQJ6_DANRE
0.0
• FL-Next
tr=Peptidylprolyl isomerase (cyclophilin)-like 2; Danio rerio (Zebrafish) (Brachydanio rerio).
0.0
• Sma3
Peptidyl-prolyl cis-trans isomerase
0.0
Internal
hypoth_v1_unigene19 1013
• AutoFact
platelet endothelial cell adhesion molecule-like; K06471 platelet/endothelial cell adhesion molecule
9.0e-29
• FL-Next
tr=Platelet endothelial cell adhesion molecule; Salmo salar (Atlantic salmon).
0.0
• Sma3
None-
C-terminus
hypoth_v1_unigene20 1143
• AutoFact
None-
• FL-Next
None-
• Sma3
None-
unknown


Juntadeandalucia

IFAPA Centro El Toruño. Ctra. N. IV Km. 654a. Camino de Tiro Pichón. El Puerto de Santa María (Cádiz), Spain.
Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29590 Campanillas (Málaga), Spain