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Assembly Name: Hypothalamus v1

UniGene Name: hypoth_v1_unigene2

Length: 949 nt

UniGene Fasta

Ace file of the UniGene hypoth_v1_unigene2

Annotations

Parent Assembly	Parent UniGene	Reads (related/total)
Solea senegalensis v2.0 (global assembly)	solea_v2.0_unigene65855	30/30

Source	Descriptions	Term	Type	e value	Identity
FL-Next	sp=Ubiquitin carboxyl-terminal hydrolase; Tetraodon nigroviridis (Green puffer).	-	-	0.0	87%
Sma3	Ubiquitin carboxyl-terminal hydrolase	-	-	1.701e-20	-
AutoFact	Ubiquitin carboxyl-terminal hydrolase n=2 Tax=Tetraodontidae RepID=Q4SLR1_TETNG	-	-	0.0	81%

Source	ECs	Term	Type	e value	Identity
Sma3	Ubiquitinyl hydrolase 1.	EC:3.4.19.12	-	5.328e-20	-

Source	Gene names
Sma3	USP14; usp14;

Source	GOs	Term	Type	e value	Identity
Sma3	ubiquitin thiolesterase activity	GO:0004221	Molecular Function	2.668e-18	-
Sma3	cysteine-type peptidase activity	GO:0008234	Molecular Function	6.818e-19	-
Sma3	ubiquitin-dependent protein catabolic process	GO:0006511	Biological Process	1.357e-17	-

Source	InterPros	Term	Type	e value	Identity
Sma3	Ubiquitin domain	IPR000626	-	5.785e-18	-
Sma3	Peptidase C19, ubiquitin carboxyl-terminal hydrolase	IPR001394	-	1.254e-21	-
Sma3	Peptidase C19, ubiquitin carboxyl-terminal hydrolase, conserved site	IPR018200	-	5.213e-19	-
Sma3	Ubiquitin conserved site	IPR019954	-	3.51e-18	-
Sma3	Ubiquitin supergroup	IPR019955	-	6.231e-15	-

Full-Lengther Next Prediction

SNPs (tot: 0)

Position	A %	C %	G %	T %	Probability
479		14		85	0.993533
531	87		12		0.992554
535			12	87	0.992554
537	12			87	0.992554
539	12		87		0.992554
542	12		87		0.992554
546	87	12			0.992554
547		12	87		0.992554
548	87	12			0.992554
623	83		16		0.994512
642	85		14		0.993533
645	87			12	0.992554
678		14		85	0.993533
806		80		20	0.995493
878		14		85	0.993533

Curation

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IFAPA Centro El Toruño. Ctra. N. IV Km. 654a. Camino de Tiro Pichón. El Puerto de Santa María (Cádiz), Spain.
Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29590 Campanillas (Málaga), Spain