| General Information |
| Organism: |
Solea senegalensis |
| Tissue: |
A pool of head kidney, spleen, thymus, brain and gill |
| Description: |
A total of 180 individuals (mean weight = 29.9 ± 6.3 g) were distributed in six 300 l cylindrical tanks (30 individuals/tank) at a salinity of 35 psu. After 24 h ofacclimatation, water was replaced and three different salinities were assayed in duplicate: 5, 35 (control), and 60 psu. Three individuals/tank were sampled at 24 and 72 h after change of water salinity. Gills, intestine, kidney and brain were rapidly dissected, frozen in liquid nitrogen and stored at -80ºC.
Short Name: cit
Funding support: RTA2009-00066-00-00 from the Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria (INIA, Spain) as well as FEDER (EU).
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| Assembly Statistics |
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| Number of unigenes: |
51507 |
| Mean contig length: |
382 |
| SNPs statistics |
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| Tot. SNPs: |
138075 |
| Unigenes with SNPs: |
23960 |
| Mean SNPs per unigene: |
5.7 |
| SSRs statistics |
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| Tot. SSRs: |
6686 |
| Mean SSRs per unigene: |
1.1 |
| SSRs di-nucl. : |
2135 |
| SSRs tri-nucl. : |
2924 |
| SSRs > tri-nucl. : |
1627 |
| Annotations statistics |
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| Annotated unigenes: |
50333 |
| Descriptions: |
37281 |
| Gos: |
6439 |
| Interpros: |
4357 |
| ECs: |
1047 |
| Keggs: |
138 |
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| Project components |
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| Assembly components: |
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| Unigenes file: |
cit_unigenes.fasta |
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| ACE file: |
cit_v1.0.ace |
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| Download annotations for specified unigenes: |
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| SFFs: |
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| SeqTrimNext reports: |
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