RNA from Solea senegalensis Hypophysis tissue sequenced using 454 Titanium sequencing technologie.
Assembly Statistics
Number of used reads:
699765
Number of unigenes:
68254
Mean contig length:
453
SNPs statistics
Tot. SNPs:
81605
Unigenes with SNPs:
11952
Mean SNPs per unigene:
6.8
SSRs statistics
Tot. SSRs:
15811
Mean SSRs per unigene:
1.2
SSRs di-nucl. :
5359
SSRs tri-nucl. :
6062
SSRs > tri-nucl. :
4390
Annotations statistics
Annotated unigenes:
60663
Descriptions:
39705
Gos:
2719
Interpros:
6894
ECs:
804
Keggs:
142
Project components
Assembly components:
Unigenes file:
hypophysis_unigenes.fasta
ACE file:
hypophysis.ace
Download annotations for specified unigenes:
SFFs:
File 1:
HCBOKFV01.sff
File 2:
HCBOKFV02.sff
SeqTrimNext reports:
File 1:
HCBOKFV01_report.pdf
File 2:
HCBOKFV02_report.pdf
IFAPA Centro El Toruño. Ctra. N. IV Km. 654a. Camino de Tiro Pichón. El Puerto de Santa María (Cádiz), Spain. Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29590 Campanillas (Málaga), Spain