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Assembly Name: Hypophysis v1
General Information
Organism: Solea senegalensis
Tissue: Hypophysis
Description: RNA from Solea senegalensis Hypophysis tissue sequenced using 454 Titanium sequencing technologie.
Assembly Statistics
Number of used reads: 699765
Number of unigenes: 68254
Mean contig length: 453
SNPs statistics
Tot. SNPs: 81605
Unigenes with SNPs: 11952
Mean SNPs per unigene: 6.8
SSRs statistics
Tot. SSRs: 15811
Mean SSRs per unigene: 1.2
SSRs di-nucl. : 5359
SSRs tri-nucl. : 6062
SSRs > tri-nucl. : 4390
Annotations statistics
Annotated unigenes: 60663
Descriptions: 39705
Gos: 2719
Interpros: 6894
ECs: 804
Keggs: 142
Project components

Assembly components:

Unigenes file: hypophysis_unigenes.fasta

ACE file: hypophysis.ace



Download annotations for specified unigenes:

Paste your unigenes names list (one unigene per line):
Maximum 10 000 names


Or upload unigenes file with names list (one unigene per line):


SFFs:
File 1: HCBOKFV01.sff

File 2: HCBOKFV02.sff


SeqTrimNext reports:

File 1: HCBOKFV01_report.pdf

File 2: HCBOKFV02_report.pdf





Juntadeandalucia

IFAPA Centro El Toruño. Ctra. N. IV Km. 654a. Camino de Tiro Pichón. El Puerto de Santa María (Cádiz), Spain.
Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29590 Campanillas (Málaga), Spain