Logo_sudoe_cb Cabecera_solea2 Img_right
HomeAssembliesBLASTSearchInstitutions

Assembly Name: Hypothalamus m-f1 v1.0

Name: PAS domain

Term: IPR000014  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
hpt_m_f1_v1.0_unigene5658 Hypothalamus m-f1 v1.0 326
• FL-Next: tr=Chromosome 3 SCAF14756, whole genome shotgun sequence; Tetraodon nigroviridis (Green puffer). 0.0
• AutoFact: potassium voltage-gated channel, subfamily H, member 7-like; K04910 potassium voltage-gated channel Eag-related subfamily H member 7 3.0e-13
Internal
hpt_m_f1_v1.0_unigene10673 Hypothalamus m-f1 v1.0 231
• FL-Next: tr=Aryl hydrocarbon receptor nuclear translocator 2; Fundulus heteroclitus (Killifish) (Mummichog). 0.0
• Sma3: Aryl hydrocarbon receptor nuclear translocator 2 1.735e-13
• AutoFact: Aryl hydrocarbon receptor nuclear translocator 2 n=1 Tax=Fundulus heteroclitus RepID=Q9YHW4_FUNHE 8.0e-21
C-terminus
hpt_m_f1_v1.0_unigene15299 Hypothalamus m-f1 v1.0 139
• FL-Next: tr=Chromosome 16 SCAF14974, whole genome shotgun sequence; Tetraodon nigroviridis (Green puffer). 0.0
• AutoFact: per2, fj43b09, wu:fj43b09; period homolog 2 (Drosophila); K02633 period circadian protein 1.0e-11
Internal

Go to Annotations List

Juntadeandalucia

IFAPA Centro El Toruño. Ctra. N. IV Km. 654a. Camino de Tiro Pichón. El Puerto de Santa María (Cádiz), Spain.
Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29590 Campanillas (Málaga), Spain