Logo_sudoe_cb Cabecera_solea2 Img_right
HomeAssembliesBLASTSearchInstitutions

Assembly Name: Hypothalamus m-f1 v1.0

Name: Tetratricopeptide repeat

Term: IPR019734  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
hpt_m_f1_v1.0_unigene14 Hypothalamus m-f1 v1.0 727
FL-Next: tr=Peptidyl-prolyl cis-trans isomerase-like 2; Salmo salar (Atlantic salmon). 0.0
Sma3: Peptidyl-prolyl cis-trans isomerase 0.0
AutoFact: Peptidyl-prolyl cis-trans isomerase-like 2 n=1 Tax=Salmo salar RepID=C0HBF0_SALSA 0.0
Internal
hpt_m_f1_v1.0_unigene423 Hypothalamus m-f1 v1.0 331
FL-Next: tr=Tetratricopeptide repeat protein 32; Salmo salar (Atlantic salmon). 0.0
Sma3: Tetratricopeptide repeat protein 32 1.571e-15
AutoFact: Tetratricopeptide repeat protein 32 n=1 Tax=Salmo salar RepID=B9EQ62_SALSA 2.0e-32
N-terminus
hpt_m_f1_v1.0_unigene735 Hypothalamus m-f1 v1.0 409
FL-Next: tr=Cell division cycle protein 27 homolog; Salmo salar (Atlantic salmon). 0.0
Sma3: Cell division cycle 27 8.217e-10
AutoFact: PREDICTED: cell division cycle protein 27 isoform 3 n=2 Tax=Eutheria RepID=UPI0000E24629 0.0
Putative C-terminus
hpt_m_f1_v1.0_unigene897 Hypothalamus m-f1 v1.0 309
FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Osmerus mordax (Rainbow smelt) (Atherina mordax). 0.0
Sma3: Peptidyl-prolyl cis-trans isomerase 0.0
AutoFact: Peptidyl-prolyl cis-trans isomerase n=1 Tax=Osmerus mordax RepID=C1BL54_OSMMO 6.0e-36
N-terminus
hpt_m_f1_v1.0_unigene959 Hypothalamus m-f1 v1.0 525
FL-Next: tr=Stress-induced phosphoprotein 1; Miichthys miiuy (Mi-iuy croaker). 0.0
Sma3: Stress-induced-phosphoprotein 1 2.012e-10
AutoFact: Stress-induced phosphoprotein 1 n=2 Tax=Sciaenidae RepID=E3URQ1_9PERO 0.0
C-terminus
hpt_m_f1_v1.0_unigene1137 Hypothalamus m-f1 v1.0 256
FL-Next: tr=Zgc:110314; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: Kinesin light chain 1 2.155e-12
AutoFact: similar to kinesin light chain 1J; K10407 kinesin light chain 9.0e-33
Putative C-terminus
hpt_m_f1_v1.0_unigene1336 Hypothalamus m-f1 v1.0 404
FL-Next: tr=Translocase of outer mitochondrial membrane 34; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: Sperm associated antigen 1 1.862e-14
AutoFact: Translocase of outer mitochondrial membrane 34 n=2 Tax=Danio rerio RepID=Q6ZM24_DANRE 4.0e-32
Internal
hpt_m_f1_v1.0_unigene1753 Hypothalamus m-f1 v1.0 265
FL-Next: tr=Stress-induced phosphoprotein 1; Miichthys miiuy (Mi-iuy croaker). 0.0
Sma3: Stress-induced-phosphoprotein 1 3.261e-10
AutoFact: Stress-induced phosphoprotein 1 n=2 Tax=Sciaenidae RepID=E3URQ1_9PERO 9.0e-34
Internal
hpt_m_f1_v1.0_unigene2156 Hypothalamus m-f1 v1.0 189
FL-Next: tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
AutoFact: Bardet-Biedl syndrome 4 2.0e-07
Internal
hpt_m_f1_v1.0_unigene2515 Hypothalamus m-f1 v1.0 241
FL-Next: tr=Mitochondrial import receptor subunit TOM34; Osmerus mordax (Rainbow smelt) (Atherina mordax). 0.0
Sma3: Mitochondrial import receptor subunit TOM34 1.825e-14
AutoFact: Mitochondrial import receptor subunit TOM34 n=1 Tax=Osmerus mordax RepID=C1BJU3_OSMMO 4.0e-31
Internal
hpt_m_f1_v1.0_unigene2854 Hypothalamus m-f1 v1.0 264
FL-Next: tr=Chromosome 1 SCAF15039, whole genome shotgun sequence; Tetraodon nigroviridis (Green puffer). 0.0
Sma3: Nuclear autoantigenic sperm protein (histone-binding) 2.24e-14
AutoFact: nasp, MGC56007, MGC85651, wu:fd20g12, zgc:56007, zgc:85651; nuclear autoantigenic sperm protein (histone-binding); K11291 nuclear autoantigenic sperm protein 5.0e-19
Internal
hpt_m_f1_v1.0_unigene3125 Hypothalamus m-f1 v1.0 317
FL-Next: tr=Chromosome undetermined SCAF14725, whole genome shotgun sequence; Tetraodon nigroviridis (Green puffer). 0.0
Sma3: Putative narg1l protein 8.836e-06
AutoFact: Unassigned protein
C-terminus
hpt_m_f1_v1.0_unigene3138 Hypothalamus m-f1 v1.0 756
FL-Next: tr=Kinesin light chain 1; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: Kinesin light chain 1 1.685e-16
AutoFact: klc1, Klc2, MGC55666, kns2, wu:fj17e04, zgc:55666, zgc:77660; kinesin light chain 1; K10407 kinesin light chain 0.0
Internal
hpt_m_f1_v1.0_unigene3518 Hypothalamus m-f1 v1.0 264
FL-Next: tr=Small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: Small glutamine-rich tetratricopeptide repeat-containing protein A 3.449e-14
AutoFact: sgta, zgc:92462; small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha 2.0e-22
C-terminus
hpt_m_f1_v1.0_unigene3552 Hypothalamus m-f1 v1.0 430
FL-Next: tr=Peptidyl-prolyl cis-trans isomerase B; Salmo salar (Atlantic salmon). 0.0
Sma3: Peptidyl-prolyl cis-trans isomerase 0.0
AutoFact: Peptidyl-prolyl cis-trans isomerase n=1 Tax=Osmerus mordax RepID=C1BLW8_OSMMO 2.0e-40
N-terminus
hpt_m_f1_v1.0_unigene3669 Hypothalamus m-f1 v1.0 444
FL-Next: tr=Tetratricopeptide repeat domain 4; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: Tetratricopeptide repeat domain 4 8.506e-10
AutoFact: ttc4, MGC56411, zgc:56411, zgc:86801; tetratricopeptide repeat domain 4 5.0e-35
Internal
hpt_m_f1_v1.0_unigene4220 Hypothalamus m-f1 v1.0 376
Sma3: Novel protein similar to vertebrate anaphase promoting complex subunit 7 (ANAPC7) 5.425e-06
putative_coding
hpt_m_f1_v1.0_unigene4292 Hypothalamus m-f1 v1.0 259
FL-Next: tr=CDC23 (Cell division cycle 23, yeast, homolog); Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: CDC23 (Cell division cycle 23, yeast, homolog) 2.574e-10
AutoFact: CDC23 (Cell division cycle 23, yeast, homolog) n=1 Tax=Danio rerio RepID=Q7ZVH3_DANRE 9.99995e-41
Internal
hpt_m_f1_v1.0_unigene4747 Hypothalamus m-f1 v1.0 411
FL-Next: tr=40 kDa peptidyl-prolyl cis-trans isomerase; Salmo salar (Atlantic salmon). 0.0
Sma3: Peptidylprolyl isomerase D (Cyclophilin D) 1.135e-14
AutoFact: Peptidylprolyl isomerase D (Cyclophilin D) n=5 Tax=Salmoninae RepID=B5DG44_SALSA 0.0
Putative C-terminus
hpt_m_f1_v1.0_unigene5048 Hypothalamus m-f1 v1.0 548
FL-Next: tr=Mitochondrial fission 1 protein; Anoplopoma fimbria (Sablefish). 0.0
Sma3: Uncharacterized protein 0.0
AutoFact: Mitochondrial fission 1 protein n=1 Tax=Anoplopoma fimbria RepID=C3KIS7_ANOFI 0.0
Complete

Go to Annotations List

Juntadeandalucia

IFAPA Centro El Toruño. Ctra. N. IV Km. 654a. Camino de Tiro Pichón. El Puerto de Santa María (Cádiz), Spain.
Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29590 Campanillas (Málaga), Spain