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Assembly Name: Gonads v1

Name: maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)

Term: GO:0000463  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
gonads_v1_unigene7282 Gonads v1 843
FL-Next: tr=Ribosome biogenesis protein BOP1; Salmo salar (Atlantic salmon). 0.0
Sma3: Ribosome biogenesis protein bop1 3.15e-10
AutoFact: T-cell immunoglobulin and mucin domain-containing protein 4 n=4 Tax=Hominoidea RepID=TIMD4_HUMAN 9.0e-13
C-terminus
gonads_v1_unigene15056 Gonads v1 2212
FL-Next: sp=Pescadillo homolog; Salmo salar (Atlantic salmon). 0.0
Sma3: Pescadillo homolog 8.182e-15
AutoFact: Eukaryotic translation initiation factor 3 subunit A n=1 Tax=Danio rerio RepID=EIF3A_DANRE 0.0
Complete
gonads_v1_unigene41871 Gonads v1 362
FL-Next: sp=Ribosome biogenesis protein bop1; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: Ribosome biogenesis protein bop1 3.15e-10
AutoFact: BOP1; block of proliferation 1 4.0e-27
Internal
gonads_v1_unigene53246 Gonads v1 401
FL-Next: tr=Ribosome biogenesis protein BOP1; Salmo salar (Atlantic salmon). 0.0
Sma3: Ribosome biogenesis protein bop1 3.431e-10
AutoFact: bop1; ribosome biogenesis protein bop1 0.0
Internal
gonads_v1_unigene64102 Gonads v1 1019
FL-Next: tr=WD repeat-containing protein 12; Salmo salar (Atlantic salmon). 0.0
Sma3: Ribosome biogenesis protein wdr12 6.119e-15
AutoFact: Ribosome biogenesis protein wdr12 n=2 Tax=Salmo salar RepID=WDR12_SALSA 0.0
C-terminus

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Juntadeandalucia

IFAPA Centro El Toruño. Ctra. N. IV Km. 654a. Camino de Tiro Pichón. El Puerto de Santa María (Cádiz), Spain.
Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29590 Campanillas (Málaga), Spain