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Assembly Name: Gonads v1

Name: tRNA binding

Term: GO:0000049  Help

Source: GO from Sma3

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
gonads_v1_unigene1667 Gonads v1 656
FL-Next: tr=Yars protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: Tyrosine--tRNA ligase, cytoplasmic 8.762e-14
AutoFact: WW domain-binding protein 2 n=1 Tax=Dicentrarchus labrax RepID=E6ZGI1_DICLA 0.0
Internal
gonads_v1_unigene2109 Gonads v1 1150
FL-Next: tr=Yars protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: Tyrosyl-tRNA synthetase 4.263e-16
AutoFact: fi18h09, wu:fb73c06, wu:fi18h09; si:ch211-129c21.1; K06521 semaphorin 4 0.0
C-terminus
gonads_v1_unigene3039 Gonads v1 387
FL-Next: tr=Heme-regulated initiation factor 2 alpha kinase; Paralichthys olivaceus (Japanese flounder) (Hippoglossus olivaceus). 0.0
Sma3: Eukaryotic translation initiation factor 2-alpha kinase 1 7.828e-09
AutoFact: SPRY domain containing protein 5.0e-10
Internal
gonads_v1_unigene6658 Gonads v1 317
FL-Next: tr=Yars protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: Tyrosine--tRNA ligase, cytoplasmic 5.813e-14
AutoFact: Unassigned protein
Internal
gonads_v1_unigene7525 Gonads v1 1372
FL-Next: sp=Cytoplasmic tRNA 2-thiolation protein 1; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: Uncharacterized protein 0.0
AutoFact: fb76e12, wu:fb76e12; zgc:171553; K12327 caldesmon 1.0e-15
Complete
gonads_v1_unigene8084 Gonads v1 433
FL-Next: tr=Multisynthetase complex auxiliary component p43; Anoplopoma fimbria (Sablefish). 0.0
Sma3: Aminoacyl tRNA synthetase complex-interacting multifunctional protein 1 1.979e-14
AutoFact: rgs12, RGS12TS, RGS12TS-I, RGS12TS-L, RGS12TS-S, cb958; regulator of G-protein signalling 12 9.99967e-42
C-terminus
gonads_v1_unigene8434 Gonads v1 872
FL-Next: tr=RWD domain-containing protein 1; Anoplopoma fimbria (Sablefish). 0.0
AutoFact: Unassigned protein
N-terminus
gonads_v1_unigene8995 Gonads v1 547
FL-Next: tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: Cytoplasmic tRNA 2-thiolation protein 2 1.228e-10
AutoFact: UPI00016E77F7 related cluster n=1 Tax=Takifugu rubripes RepID=UPI00016E77F7 4.0e-12
N-terminus
gonads_v1_unigene9222 Gonads v1 746
FL-Next: tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: Cytosolic thiouridylase subunit 2 homolog (S. pombe) 2.816e-10
C-terminus
gonads_v1_unigene15121 Gonads v1 1173
FL-Next: tr=Multisynthetase complex auxiliary component p43; Anoplopoma fimbria (Sablefish). 0.0
Sma3: Multisynthetase complex auxiliary component p43 0.0
AutoFact: Cytochrome c oxidase polypeptide VIa n=5 Tax=Salmoninae RepID=C1BH66_ONCMY 2.0e-31
Complete
gonads_v1_unigene19824 Gonads v1 476
FL-Next: tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: Cysteinyl-tRNA synthetase 8.883e-25
AutoFact: Myosin heavy chain n=1 Tax=Dicentrarchus labrax RepID=Q2PMW9_DICLA 9.0e-16
Internal
gonads_v1_unigene20224 Gonads v1 980
FL-Next: tr=Cysteinyl-tRNA synthetase, cytoplasmic; Salmo salar (Atlantic salmon). 0.0
Sma3: Cysteinyl-tRNA synthetase 2.145e-21
AutoFact: Caldesmon multi-domain protein 2.0e-40
Internal
gonads_v1_unigene20964 Gonads v1 1208
FL-Next: tr=Uncharacterized protein; Xenopus tropicalis (Western clawed frog) (Silurana tropicalis). 0.0
C-terminus
gonads_v1_unigene23210 Gonads v1 570
FL-Next: tr=Uncharacterized protein; Xenopus tropicalis (Western clawed frog) (Silurana tropicalis). 0.0
Sma3: GCN2 protein 1.968e-10
Internal
gonads_v1_unigene26177 Gonads v1 2112
FL-Next: tr=Phenylalanyl-tRNA synthetase alpha chain; Salmo salar (Atlantic salmon). 0.0
Sma3: Phenylalanyl-tRNA synthetase alpha chain 0.0
AutoFact: Nck-associated protein 1 n=1 Tax=Dicentrarchus labrax RepID=E6ZFA3_DICLA 1.0e-11
Complete
gonads_v1_unigene26509 Gonads v1 819
FL-Next: tr=Chromosome 7 SCAF14601, whole genome shotgun sequence; Tetraodon nigroviridis (Green puffer). 0.0
Sma3: Si:dkey-71l1.3 5.735e-06
N-terminus
gonads_v1_unigene29842 Gonads v1 210
FL-Next: tr=Cysteinyl-tRNA synthetase, cytoplasmic; Salmo salar (Atlantic salmon). 0.0
Sma3: Cysteinyl-tRNA synthetase 4.431e-17
AutoFact: cars; cysteinyl-tRNA synthetase (EC:6.1.1.16); K01883 cysteinyl-tRNA synthetase [EC:6.1.1.16] 6.0e-21
Putative C-terminus
gonads_v1_unigene31004 Gonads v1 204
FL-Next: tr=Tyrosyl-tRNA synthetase, cytoplasmic; Salmo salar (Atlantic salmon). 0.0
Sma3: Yars protein 9.611e-06
AutoFact: Tyrosyl-tRNA synthetase (Fragment) n=3 Tax=Clupeocephala RepID=Q1LWM2_DANRE 1.0e-07
N-terminus
gonads_v1_unigene31708 Gonads v1 373
FL-Next: tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: Cysteinyl-tRNA synthetase 1.995e-21
AutoFact: cars, sb:cb71; cysteinyl-tRNA synthetase (EC:6.1.1.16); K01883 cysteinyl-tRNA synthetase [EC:6.1.1.16] 0.0
Internal
gonads_v1_unigene43551 Gonads v1 391
FL-Next: tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: Phenylalanyl-tRNA synthetase, mitochondrial 9.766e-06
AutoFact: Zgc:173439 protein (Fragment) n=3 Tax=Danio rerio RepID=A2RV45_DANRE 0.0
Putative N-terminus

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Juntadeandalucia

IFAPA Centro El Toruño. Ctra. N. IV Km. 654a. Camino de Tiro Pichón. El Puerto de Santa María (Cádiz), Spain.
Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29590 Campanillas (Málaga), Spain