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Assembly Name: Gonads v1

Name: Transcription factor jumonji, JmjN

Term: IPR003349  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
gonads_v1_unigene8 Gonads v1 709
FL-Next: tr=Novel protein similar to vertebrate Jumonji, AT rich interactive domain 1B (RBP2-like) (JARID1B); Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
AutoFact: DiGeorge syndrome critical region protein 14-like 0.0
C-terminus
gonads_v1_unigene750 Gonads v1 701
FL-Next: tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
AutoFact: wu:fd55d07; zgc:153957; K06709 jumonji domain-containing protein 2 [EC:1.14.11.-] 0.0
C-terminus
gonads_v1_unigene2449 Gonads v1 521
FL-Next: tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
AutoFact: similar to coiled-coil domain containing 46 9.0e-12
Putative C-terminus
gonads_v1_unigene2917 Gonads v1 942
FL-Next: tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: Lysine (K)-specific demethylase 4B 2.468e-09
AutoFact: wu:fc27h11; zgc:110185 (EC:2.7.7.7); K03510 DNA polymerase iota subunit [EC:2.7.7.7] 2.0e-30
N-terminus
gonads_v1_unigene3253 Gonads v1 728
FL-Next: tr=Novel protein similar to vertebrate jumonji, AT rich interactive domain 1 protein family; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: Lysine (K)-specific demethylase 5C 1.367e-08
Internal
gonads_v1_unigene6207 Gonads v1 188
FL-Next: tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Internal
gonads_v1_unigene13067 Gonads v1 690
FL-Next: tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
AutoFact: similar to Protein C9orf72 homolog 1.0e-37
C-terminus
gonads_v1_unigene16699 Gonads v1 1056
FL-Next: tr=Novel protein similar to vertebrate jumonji, AT rich interactive domain 1 protein family; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: Histone demethylase JARID1B 5.971e-09
AutoFact: Tropomyosin 1 (Alpha) n=1 Tax=Danio rerio RepID=Q6NYQ0_DANRE 3.0e-30
N-terminus
gonads_v1_unigene21175 Gonads v1 305
Putative coding
gonads_v1_unigene21877 Gonads v1 511
FL-Next: tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Internal
gonads_v1_unigene22778 Gonads v1 283
FL-Next: tr=Chromosome undetermined SCAF10218, whole genome shotgun sequence; Tetraodon nigroviridis (Green puffer). 0.0
Sma3: Lysine (K)-specific demethylase 4B 2.243e-09
AutoFact: bap1, si:dkey-42i9.9; BRCA1 associated protein-1 (ubiquitin carboxy-terminal hydrolase) (EC:3.4.19.12); K08588 ubiquitin carboxyl-terminal hydrolase BAP1 [EC:3.4.19.12] 3.0e-37
Internal
gonads_v1_unigene23609 Gonads v1 320
FL-Next: tr=Novel protein similar to vertebrate Jumonji, AT rich interactive domain 1B (RBP2-like) (JARID1B); Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: Lysine (K)-specific demethylase 5C 1.706e-08
Internal
gonads_v1_unigene24607 Gonads v1 428
FL-Next: tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: Lysine (K)-specific demethylase 5C 1.699e-08
AutoFact: Unassigned protein
Internal
gonads_v1_unigene25327 Gonads v1 397
FL-Next: tr=Novel protein similar to vertebrate Jumonji, AT rich interactive domain 1B (RBP2-like) (JARID1B); Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
AutoFact: dbn1; drebrin 1 2.0e-22
Internal
gonads_v1_unigene28099 Gonads v1 226
FL-Next: tr=Chromosome 9 SCAF14729, whole genome shotgun sequence; Tetraodon nigroviridis (Green puffer). 0.0
Sma3: Lysine (K)-specific demethylase 5C 1.562e-08
Internal
gonads_v1_unigene28923 Gonads v1 463
FL-Next: tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: Histone demethylase JARID1B 5.971e-09
AutoFact: kdm5bb, cb264, plu1, zgc:85741; lysine (K)-specific demethylase 5Bb (EC:1.14.11.-); K11446 histone demethylase JARID1 [EC:1.14.11.-] 0.0
N-terminus
gonads_v1_unigene29688 Gonads v1 372
FL-Next: tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
AutoFact: wu:fd55d07; zgc:153957; K06709 jumonji domain-containing protein 2 [EC:1.14.11.-] 0.0
Internal
gonads_v1_unigene35770 Gonads v1 156
FL-Next: tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: Zgc:153957 8.526e-06
AutoFact: similar to jumonji domain containing 2C; K06709 jumonji domain-containing protein 2 [EC:1.14.11.-] 7.0e-15
Internal
gonads_v1_unigene44624 Gonads v1 284
AutoFact: Unassigned protein
unknown
gonads_v1_unigene47865 Gonads v1 329
FL-Next: tr=Chromosome undetermined SCAF10218, whole genome shotgun sequence; Tetraodon nigroviridis (Green puffer). 0.0
AutoFact: lysine-specific demethylase 4A [Rattus norvegicus] gb|EDL90189.1| jumonji domain containing 2A (predicted) [Rattus norvegicus] 6.0e-20
Putative C-terminus

Go to Annotations List

Juntadeandalucia

IFAPA Centro El Toruño. Ctra. N. IV Km. 654a. Camino de Tiro Pichón. El Puerto de Santa María (Cádiz), Spain.
Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29590 Campanillas (Málaga), Spain