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Assembly Name: Gonads v1

Name: Laminin B type IV

Term: IPR000034  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
gonads_v1_unigene9514 Gonads v1 398
FL-Next: tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: Laminin, alpha 2 2.012e-10
C-terminus
gonads_v1_unigene13972 Gonads v1 706
FL-Next: tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: Laminin subunit gamma-1 8.538e-10
AutoFact: Unassigned protein
Internal
gonads_v1_unigene22421 Gonads v1 482
FL-Next: tr=Laminin alpha 5; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: Laminin, alpha 5 2.17e-09
Internal
gonads_v1_unigene22476 Gonads v1 277
Putative coding
gonads_v1_unigene23951 Gonads v1 277
FL-Next: tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: Laminin alpha 2 chain 7.44e-06
AutoFact: PREDICTED: zinc finger BED domain-containing protein 1-like n=2 Tax=Acyrthosiphon pisum RepID=UPI0002061BE3 6.0e-17
Internal
gonads_v1_unigene29722 Gonads v1 602
FL-Next: tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: Heparan sulfate proteoglycan 2 1.574e-09
AutoFact: Basement membrane-specific heparan sulfate proteoglycan core protein n=9 Tax=Eutheria RepID=PGBM_HUMAN 7.0e-21
N-terminus
gonads_v1_unigene30417 Gonads v1 646
FL-Next: tr=Laminin alpha 1; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
AutoFact: lama1; laminin, alpha 1; K05637 laminin, alpha 1/2 0.0
Internal
gonads_v1_unigene39388 Gonads v1 248
FL-Next: tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
AutoFact: HSPG2; heparan sulfate proteoglycan 2; K06255 heparan sulfate proteoglycan 2 (perlecan) 4.0e-10
Internal
gonads_v1_unigene42359 Gonads v1 308
FL-Next: tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: Heparan sulfate proteoglycan 2 2.024e-09
AutoFact: basement membrane-specific heparan sulfate proteoglycan core protein-like 6.0e-24
Internal
gonads_v1_unigene46971 Gonads v1 256
FL-Next: tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: Laminin alpha 2 chain short splice variant 8.991e-06
AutoFact: Lama2, 5830440B04, KIAA4087, dy, mKIAA4087, mer, merosin; laminin, alpha 2; K05637 laminin, alpha 1/2 4.0e-09
Internal
gonads_v1_unigene48408 Gonads v1 284
FL-Next: tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
AutoFact: laminin subunit alpha-2-like 5.0e-18
Internal
gonads_v1_unigene49770 Gonads v1 444
FL-Next: tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: Heparan sulfate proteoglycan 2 3.949e-09
AutoFact: HSPG2, HSPG; heparan sulfate proteoglycan 2; K06255 heparan sulfate proteoglycan 2 (perlecan) 3.0e-37
Internal
gonads_v1_unigene52717 Gonads v1 405
FL-Next: tr=LamC1 protein; Tetraodon nigroviridis (Green puffer). 0.0
Sma3: Laminin subunit gamma-1 6.345e-10
AutoFact: Laminin gamma-1 chain (Fragment) n=1 Tax=Siniperca chuatsi RepID=D9ILW6_SINCH 0.0
Internal
gonads_v1_unigene52832 Gonads v1 408
FL-Next: tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: Novel protein similar to human laminin, gamma 3 (LAMC3) 6.51e-06
AutoFact: si:dkey-245l10.1; K06247 laminin, gamma 3 1.0e-25
Internal
gonads_v1_unigene53297 Gonads v1 392
FL-Next: tr=Laminin gamma-1; Oryzias latipes (Medaka fish) (Japanese ricefish). 0.0
Sma3: Netrin 1 2.681e-13
AutoFact: Laminin gamma-1 n=1 Tax=Oryzias latipes RepID=D7UU22_ORYLA 0.0
Internal

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Juntadeandalucia

IFAPA Centro El Toruño. Ctra. N. IV Km. 654a. Camino de Tiro Pichón. El Puerto de Santa María (Cádiz), Spain.
Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29590 Campanillas (Málaga), Spain