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Assembly Name: Gonads v1

Name: Rossmann-like alpha/beta/alpha sandwich fold

Term: IPR014729  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
gonads_v1_unigene34 Gonads v1 1529
FL-Next: sp=Argininosuccinate synthase; Salmo salar (Atlantic salmon). 0.0
Sma3: Uncharacterized protein 0.0
AutoFact: Unassigned protein
Complete
gonads_v1_unigene228 Gonads v1 1350
FL-Next: tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: Valyl-tRNA synthetase 5.87e-13
AutoFact: PREDICTED: doublecortin domain-containing protein 2 n=1 Tax=Monodelphis domestica RepID=UPI0000F2C849 0.0
C-terminus
gonads_v1_unigene361 Gonads v1 873
FL-Next: tr=Asparagine synthetase domain-containing protein 1; Salmo salar (Atlantic salmon). 0.0
Sma3: Asparagine synthetase domain-containing protein 1 1.041e-19
AutoFact: PREDICTED: zinc finger protein 235-like n=1 Tax=Ailuropoda melanoleuca RepID=UPI0001DEBC86 3.0e-17
Internal
gonads_v1_unigene426 Gonads v1 1496
FL-Next: tr=Glutaminyl-tRNA synthetase; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: Glutaminyl-tRNA synthetase 2.428e-12
AutoFact: dnttip2, cb88, sb:cb1016, sb:cb88; deoxynucleotidyltransferase, terminal, interacting protein 2 0.0
C-terminus
gonads_v1_unigene476 Gonads v1 762
FL-Next: tr=Probable glutamyl-tRNA synthetase, mitochondrial; Salmo salar (Atlantic salmon). 0.0
Sma3: Probable glutamate--tRNA ligase, mitochondrial 5.441e-14
AutoFact: MHC II invariant chain n=1 Tax=Siniperca chuatsi RepID=Q6EE25_SINCH 0.0
C-terminus
gonads_v1_unigene540 Gonads v1 633
FL-Next: tr='Isoleucyl-tRNA synthetase, cytoplasmic'; Dicentrarchus labrax (European seabass) (Morone labrax). 0.0
Sma3: Isoleucyl-tRNA synthetase 1.257e-13
AutoFact: AlkB, alkylation repair homolog 5 (E. coli) n=1 Tax=Danio rerio RepID=Q08BA6_DANRE 0.0
C-terminus
gonads_v1_unigene617 Gonads v1 677
FL-Next: tr=Asparagine synthetase; Salmo salar (Atlantic salmon). 0.0
Sma3: Asparagine synthetase 1.99e-13
AutoFact: Nucleolar protein 8 n=1 Tax=Dicentrarchus labrax RepID=E6ZGF4_DICLA 0.0
N-terminus
gonads_v1_unigene872 Gonads v1 1624
FL-Next: tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: Glutamyl-prolyl-tRNA synthetase 8.897e-14
AutoFact: cnot2; zgc:162316; K12605 CCR4-NOT transcription complex subunit 2 8.0e-13
C-terminus
gonads_v1_unigene1667 Gonads v1 656
FL-Next: tr=Yars protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: Tyrosine--tRNA ligase, cytoplasmic 8.762e-14
AutoFact: WW domain-binding protein 2 n=1 Tax=Dicentrarchus labrax RepID=E6ZGI1_DICLA 0.0
Internal
gonads_v1_unigene1834 Gonads v1 841
FL-Next: tr=Arginyl-tRNA synthetase 2, mitochondrial (Putative); Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
AutoFact: Unassigned protein
Internal
gonads_v1_unigene2090 Gonads v1 532
FL-Next: tr=Novel protein similar to vertebrate phosphate cytidylyltransferase 2, ethanolamine (PCYT2, zgc:103434); Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: Phosphate cytidylyltransferase 2, ethanolamine 7.274e-15
AutoFact: Interleukin-8 n=1 Tax=Anoplopoma fimbria RepID=C3KI03_ANOFI 1.0e-31
Internal
gonads_v1_unigene2109 Gonads v1 1150
FL-Next: tr=Yars protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: Tyrosyl-tRNA synthetase 4.263e-16
AutoFact: fi18h09, wu:fb73c06, wu:fi18h09; si:ch211-129c21.1; K06521 semaphorin 4 0.0
C-terminus
gonads_v1_unigene2251 Gonads v1 803
FL-Next: tr=Leucyl-tRNA synthetase, cytoplasmic; Salmo salar (Atlantic salmon). 0.0
Sma3: Leucyl-tRNA synthetase 1.099e-09
AutoFact: rabep1, si:ch211-284f22.1; rabaptin, RAB GTPase binding effector protein 1; K12480 Rab GTPase-binding effector protein 1 0.0
C-terminus
gonads_v1_unigene2341 Gonads v1 400
FL-Next: tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: Leucyl-tRNA synthetase, cytoplasmic 8.215e-06
N-terminus
gonads_v1_unigene3278 Gonads v1 2518
FL-Next: tr=Guanine monphosphate synthetase; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: Guanine monphosphate synthetase 0.0
AutoFact: Ribosome production factor 1 n=1 Tax=Osmerus mordax RepID=C1BLK5_OSMMO 4.0e-24
Complete
gonads_v1_unigene3816 Gonads v1 829
FL-Next: tr='Isoleucyl-tRNA synthetase, cytoplasmic'; Dicentrarchus labrax (European seabass) (Morone labrax). 0.0
Sma3: Isoleucyl-tRNA synthetase 1.257e-13
Internal
gonads_v1_unigene4230 Gonads v1 497
FL-Next: tr=Chromosome 18 SCAF15038, whole genome shotgun sequence; Tetraodon nigroviridis (Green puffer). 0.0
Sma3: 3'-phosphoadenosine 5'-phosphosulfate synthase 2 1.613e-14
C-terminus
gonads_v1_unigene4323 Gonads v1 574
FL-Next: tr=Leucyl-tRNA synthetase, cytoplasmic; Salmo salar (Atlantic salmon). 0.0
Sma3: Leucyl-tRNA synthetase 1.285e-09
AutoFact: PREDICTED: vascular endothelial zinc finger 1 n=1 Tax=Danio rerio RepID=UPI0000F1EFD0 4.2039e-45
Internal
gonads_v1_unigene4412 Gonads v1 467
FL-Next: tr=Novel protein similar to vertebrate 3'-phosphoadenosine 5'-phosphosulfate synthase 1 (PAPSS1, zgc:194985); Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: 3'-phosphoadenosine 5'-phosphosulfate synthase 2 1.673e-14
AutoFact: Ran GTPase-activating protein 1 n=1 Tax=Dicentrarchus labrax RepID=E6ZGM2_DICLA 0.0
Internal
gonads_v1_unigene4696 Gonads v1 1917
FL-Next: sp=Methionyl-tRNA synthetase, mitochondrial; Takifugu rubripes (Japanese pufferfish) (Fugu rubripes). 0.0
Sma3: Uncharacterized protein 0.0
AutoFact: slc39a7, HKE4, id:ibd5081, ke4, wu:fc28c09; solute carrier family 39 (zinc transporter), member 7 0.0001
Putative Complete

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Juntadeandalucia

IFAPA Centro El Toruño. Ctra. N. IV Km. 654a. Camino de Tiro Pichón. El Puerto de Santa María (Cádiz), Spain.
Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29590 Campanillas (Málaga), Spain