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Assembly Name: Gonads v1

Name: cytoplasmic mRNA processing body

Term: GO:0000932  Help

Source: GO from Sma3

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
gonads_v1_unigene4420 Gonads v1 463
FL-Next: tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: YjeF domain-containing protein 1 1.023e-15
AutoFact: Unassigned protein
C-terminus
gonads_v1_unigene11763 Gonads v1 433
FL-Next: tr=Novel protein similar to vertebrate autoantigen (RCD-8); Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: Enhancer of mRNA-decapping protein 4 1.127e-10
AutoFact: Novel protein (Fragment) n=2 Tax=Danio rerio RepID=A2ARH5_DANRE 1.0e-28
C-terminus
gonads_v1_unigene11874 Gonads v1 762
FL-Next: tr=Zgc:154086; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: Mov10l1, Moloney leukemia virus 10-like 1, homolog 2.022e-09
Putative C-terminus
gonads_v1_unigene12440 Gonads v1 860
FL-Next: tr=Helicase MOV-10; Salmo salar (Atlantic salmon). 0.0
Sma3: Mov10l1, Moloney leukemia virus 10-like 1, homolog 1.698e-09
C-terminus
gonads_v1_unigene13263 Gonads v1 579
FL-Next: sp=BTB/POZ domain-containing protein 6-B; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: BTB (POZ) domain containing 3 4.191e-09
C-terminus
gonads_v1_unigene13302 Gonads v1 797
FL-Next: tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: YjeF domain-containing protein 1 1.023e-15
AutoFact: ppp4r2a, fe11b04, ppp4r2, wu:fe11b04; protein phosphatase 4, regulatory subunit 2a 0.0
Internal
gonads_v1_unigene14819 Gonads v1 456
FL-Next: tr=Btbd2 protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: BTB (POZ) domain containing 2 1.378e-09
AutoFact: Fam96a, MGC105538, RGD1307481; family with sequence similarity 96, member A 0.0
Internal
gonads_v1_unigene20223 Gonads v1 474
FL-Next: tr=Argonaute 2; Gobiocypris rarus. 0.0
Sma3: Argonaute 2 5.96e-10
AutoFact: PREDICTED: transmembrane protein 161B n=1 Tax=Rattus norvegicus RepID=UPI0001CF48AA 0.0
Internal
gonads_v1_unigene20332 Gonads v1 332
FL-Next: tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: Argonaute 2 6.113e-10
C-terminus
gonads_v1_unigene26076 Gonads v1 459
FL-Next: tr=Argonaute 2; Gobiocypris rarus. 0.0
Sma3: Argonaute 2 5.661e-10
AutoFact: slc6a19, wu:fd58f10, zgc:66050; solute carrier family 6 (neurotransmitter transporter), member 19; K05334 solute carrier family 6 (neurotransmitter transporter) member 19 3.0e-05
Internal
gonads_v1_unigene29702 Gonads v1 325
FL-Next: tr=Eukaryotic translation initiation factor 2C 3; Salmo salar (Atlantic salmon). 0.0
Sma3: Argonaute 2 5.96e-10
AutoFact: similar to eukaryotic translation initiation factor 2C, 3; K11593 eukaryotic translation initiation factor 2C 0.0
Internal
gonads_v1_unigene29718 Gonads v1 336
FL-Next: tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: Protein PAT1 homolog b 4.758e-11
AutoFact: Protein PAT1 homolog 1 n=3 Tax=Danio rerio RepID=PATL1_DANRE 0.0
Internal
gonads_v1_unigene37690 Gonads v1 240
FL-Next: tr=Novel protein similar to vertebrate autoantigen (RCD-8); Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: Enhancer of mRNA-decapping protein 4 8.506e-11
AutoFact: Novel protein similar to vertebrate autoantigen (RCD-8) n=1 Tax=Danio rerio RepID=A5PN03_DANRE 1.0e-23
Internal
gonads_v1_unigene44176 Gonads v1 491
FL-Next: tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: Argonaute 2 6.19e-10
AutoFact: eukaryotic translation initiation factor 2C, 4; K11593 eukaryotic translation initiation factor 2C 0.0
Internal
gonads_v1_unigene45556 Gonads v1 162
FL-Next: tr=Argonaute 2; Gobiocypris rarus. 0.0
Sma3: Argonaute 2 5.735e-10
AutoFact: argonaute 2-like; K11593 eukaryotic translation initiation factor 2C 3.0e-18
Internal
gonads_v1_unigene51610 Gonads v1 182
FL-Next: sp=Protein argonaute-3; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
AutoFact: eukaryotic translation initiation factor 2C, 1-like; K11593 eukaryotic translation initiation factor 2C 5.0e-10
C-terminus
gonads_v1_unigene56277 Gonads v1 288
FL-Next: tr=Chromosome undetermined SCAF10343, whole genome shotgun sequence; Tetraodon nigroviridis (Green puffer). 0.0
Sma3: Enhancer of mRNA-decapping protein 4 1.161e-10
AutoFact: edc4, si:ch211-237c7.1, wu:fe26b05; enhancer of mRNA decapping 4; K12616 enhancer of mRNA-decapping protein 4 8.0e-31
Internal

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Juntadeandalucia

IFAPA Centro El Toruño. Ctra. N. IV Km. 654a. Camino de Tiro Pichón. El Puerto de Santa María (Cádiz), Spain.
Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29590 Campanillas (Málaga), Spain