Logo_sudoe_cb Cabecera_solea2 Img_right
HomeAssembliesBLASTSearchInstitutions

Assembly Name: Gonads v1

Name: Zinc finger, RING/FYVE/PHD-type

Term: IPR013083  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
gonads_v1_unigene8 Gonads v1 709
FL-Next: tr=Novel protein similar to vertebrate Jumonji, AT rich interactive domain 1B (RBP2-like) (JARID1B); Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
AutoFact: DiGeorge syndrome critical region protein 14-like 0.0
C-terminus
gonads_v1_unigene24 Gonads v1 1111
FL-Next: tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
AutoFact: DnaJ homolog subfamily C member 3 n=1 Tax=Salmo salar RepID=B5X4V9_SALSA 0.0
C-terminus
gonads_v1_unigene59 Gonads v1 1968
FL-Next: tr=Zgc:158807 protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: Uncharacterized protein 0.0
AutoFact: PREDICTED: WD repeat-containing protein 11-like n=1 Tax=Anolis carolinensis RepID=UPI0002038DCC 0.0
Complete
gonads_v1_unigene156 Gonads v1 982
FL-Next: tr=Synovial apoptosis inhibitor 1, synoviolin; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: Synovial apoptosis inhibitor 1, synoviolin 1.697e-09
AutoFact: E3 ubiquitin-protein ligase synoviolin n=3 Tax=Danio rerio RepID=SYVN1_DANRE 0.0
N-terminus
gonads_v1_unigene284 Gonads v1 861
FL-Next: tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: LOC100127651 protein 6.51e-06
AutoFact: ring finger protein 145-like 0.0
N-terminus
gonads_v1_unigene285 Gonads v1 1616
FL-Next: tr=Inhibitor of growth protein 5; Esox lucius (Northern pike). 0.0
Sma3: Inhibitor of growth protein 1 5.087e-13
AutoFact: Inhibitor of growth protein 5 n=3 Tax=Neognathi RepID=C1BXW8_ESOLU 0.0
Complete
gonads_v1_unigene310 Gonads v1 1120
FL-Next: tr=Vacuolar protein sorting-associated protein 41 homolog; Dicentrarchus labrax (European seabass) (Morone labrax). 0.0
Sma3: Vacuolar protein sorting-associated protein 41 homolog 6.276e-15
AutoFact: Farnesyl pyrophosphate synthetase n=1 Tax=Salmo salar RepID=B5X3Y4_SALSA 0.0
C-terminus
gonads_v1_unigene311 Gonads v1 1719
FL-Next: tr=Autocrine motility factor receptor; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: Autocrine motility factor receptor 6.712e-10
AutoFact: Gag-pol fusion polyprotein n=2 Tax=Takifugu rubripes RepID=Q8AVA9_TAKRU 2.0e-19
N-terminus
gonads_v1_unigene326 Gonads v1 1593
FL-Next: tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: Bromodomain adjacent to zinc finger domain protein 2B 1.319e-08
Complete
gonads_v1_unigene422 Gonads v1 2008
FL-Next: tr=Deltex-3-like; Salmo salar (Atlantic salmon). 0.0
Sma3: Deltex homolog 2 3.02e-09
AutoFact: MGC69128 protein n=5 Tax=Xenopus RepID=Q6PF26_XENLA 0.0
C-terminus
gonads_v1_unigene445 Gonads v1 1086
FL-Next: tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: Ring finger protein 40 8.403e-18
AutoFact: Interferon-stimulated gene 15 n=1 Tax=Paralichthys olivaceus RepID=D0FZQ9_PAROL 0.0
C-terminus
gonads_v1_unigene455 Gonads v1 786
FL-Next: tr=All-1 related protein; Takifugu rubripes (Japanese pufferfish) (Fugu rubripes). 0.0
Sma3: Myeloid/lymphoid or mixed-lineage leukemia 3 4.705e-09
AutoFact: MGC171538, fk30b12, wu:fk30b12; zgc:171538; K07970 beta-1,3-N-acetylglucosaminyltransferase 3 [EC:2.4.1.-] 0.0
C-terminus
gonads_v1_unigene556 Gonads v1 847
FL-Next: tr=Chromosome 13 SCAF15000, whole genome shotgun sequence; Tetraodon nigroviridis (Green puffer). 0.0
Sma3: TBP-associated factor 3 2.056e-10
AutoFact: mitochondrial ribosomal protein S2-like 0.0
Internal
gonads_v1_unigene666 Gonads v1 1106
FL-Next: tr=Atrxl protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: Alpha thalassemia/mental retardation syndrome X-linked 3.665e-10
AutoFact: DUF3585 domain containing protein 3.0e-17
Putative N-terminus
gonads_v1_unigene750 Gonads v1 701
FL-Next: tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
AutoFact: wu:fd55d07; zgc:153957; K06709 jumonji domain-containing protein 2 [EC:1.14.11.-] 0.0
C-terminus
gonads_v1_unigene756 Gonads v1 2693
FL-Next: tr=Chromosome 18 SCAF15027, whole genome shotgun sequence; Tetraodon nigroviridis (Green puffer). 0.0
Sma3: Si:ch211-227i14.2 6.254e-08
C-terminus
gonads_v1_unigene766 Gonads v1 655
FL-Next: tr=Chromosome 1 SCAF14603, whole genome shotgun sequence; Tetraodon nigroviridis (Green puffer). 0.0
N-terminus
gonads_v1_unigene1143 Gonads v1 575
FL-Next: tr=Novel protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Internal
gonads_v1_unigene1196 Gonads v1 867
FL-Next: sp=Ubiquitin carboxyl-terminal hydrolase; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: Ubiquitin carboxyl-terminal hydrolase 1.655e-12
N-terminus
gonads_v1_unigene1205 Gonads v1 1855
FL-Next: tr=E3 ubiquitin-protein ligase RAD18; Anoplopoma fimbria (Sablefish). 0.0
AutoFact: impact; zgc:103672 0.0
Complete

Go to Annotations List

Juntadeandalucia

IFAPA Centro El Toruño. Ctra. N. IV Km. 654a. Camino de Tiro Pichón. El Puerto de Santa María (Cádiz), Spain.
Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29590 Campanillas (Málaga), Spain