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Assembly Name: Hypothalamus v1

Name: DNA mismatch repair protein MutS, C-terminal

Term: IPR000432  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
hypoth_v1_unigene4880 Hypothalamus v1 299
• FL-Next: tr=Mismatch repair protein Msh2; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
• AutoFact: msh2, wu:fc06b02, wu:fc13e09, zgc:55333; mutS homolog 2 (E. coli); K08735 DNA mismatch repair protein MSH2 5.0e-35
N-terminus
hypoth_v1_unigene5811 Hypothalamus v1 352
• FL-Next: tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
• AutoFact: similar to mutS homolog 3; K08736 DNA mismatch repair protein MSH3 4.0e-32
Internal
hypoth_v1_unigene8964 Hypothalamus v1 427
• FL-Next: tr=Mismatch repair protein Msh6; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
• Sma3: MutS homolog 6 (E. coli) 4.879e-09
• AutoFact: msh6, cb326, wu:fb36c12; mutS homolog 6 (E. coli); K08737 DNA mismatch repair protein MSH6 0.0
Internal
hypoth_v1_unigene38728 Hypothalamus v1 364
• FL-Next: tr=Novel protein similar to vertebrate mutS homolog 3 (E. coli) (MSH3); Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
• AutoFact: novel protein similar to vertebrate mutS homolog 3 (E. coli) (MSH3); K08736 DNA mismatch repair protein MSH3 3.0e-40
Internal
hypoth_v1_unigene48471 Hypothalamus v1 174
• FL-Next: tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
• Sma3: MutS homolog 3 (E. coli) 5.735e-06
• AutoFact: novel protein similar to vertebrate mutS homolog 3 (E. coli) (MSH3); K08736 DNA mismatch repair protein MSH3 2.0e-07
Internal

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Juntadeandalucia

IFAPA Centro El Toruño. Ctra. N. IV Km. 654a. Camino de Tiro Pichón. El Puerto de Santa María (Cádiz), Spain.
Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29590 Campanillas (Málaga), Spain