Logo_sudoe_cb Cabecera_solea2 Img_right
HomeAssembliesBLASTSearchInstitutions

Assembly Name: Hypothalamus v1

Name: tRNA binding

Term: GO:0000049  Help

Source: GO from Sma3

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
hypoth_v1_unigene749 Hypothalamus v1 595
FL-Next: sp=tRNA wybutosine-synthesizing protein 5; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: tRNA wybutosine-synthesizing protein 5 8.506e-11
AutoFact: MGC154110, im:7148946, m:7148946; zgc:154110 0.0
Internal
hypoth_v1_unigene2701 Hypothalamus v1 258
FL-Next: tr=Multisynthetase complex auxiliary component p43; Anoplopoma fimbria (Sablefish). 0.0
Sma3: Aminoacyl tRNA synthetase complex-interacting multifunctional protein 1 9.311e-15
AutoFact: Multisynthetase complex auxiliary component p43 n=1 Tax=Anoplopoma fimbria RepID=C3KIH3_ANOFI 6.0e-15
C-terminus
hypoth_v1_unigene3637 Hypothalamus v1 401
FL-Next: tr=tRNA (Guanine-n(7)-)-methyltransferase b; Ictalurus punctatus (Channel catfish). 0.0
Sma3: tRNA (guanine(46)-N(7))-methyltransferase 8.517e-15
AutoFact: tRNA (Guanine-n(7)-)-methyltransferase b n=1 Tax=Ictalurus punctatus RepID=E3TE09_ICTPU 0.0
C-terminus
hypoth_v1_unigene10688 Hypothalamus v1 403
FL-Next: tr=Uncharacterized protein; Xenopus tropicalis (Western clawed frog) (Silurana tropicalis). 0.0
AutoFact: eif2ak4, GCN2; eukaryotic translation initiation factor 2 alpha kinase 4; K08860 eukaryotic translation initiation factor 2-alpha kinase [EC:2.7.11.1] 5.60519e-45
Internal
hypoth_v1_unigene12320 Hypothalamus v1 689
FL-Next: sp=Phenylalanyl-tRNA synthetase alpha chain; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: PheRS 2.249e-19
AutoFact: Phenylalanyl-tRNA synthetase alpha chain n=2 Tax=Danio rerio RepID=SYFA_DANRE 0.0
Internal
hypoth_v1_unigene15392 Hypothalamus v1 184
FL-Next: tr=Cysteinyl-tRNA synthetase, cytoplasmic; Salmo salar (Atlantic salmon). 0.0
Sma3: Cysteinyl-tRNA synthetase 3.631e-17
AutoFact: cars, sb:cb71; cysteinyl-tRNA synthetase (EC:6.1.1.16); K01883 cysteinyl-tRNA synthetase [EC:6.1.1.16] 9.0e-12
Internal
hypoth_v1_unigene16097 Hypothalamus v1 397
FL-Next: tr=Multisynthetase complex auxiliary component p43; Anoplopoma fimbria (Sablefish). 0.0
Sma3: Tyrosyl-tRNA synthetase 4.422e-16
AutoFact: Multisynthetase complex auxiliary component p43 n=1 Tax=Anoplopoma fimbria RepID=C3KIH3_ANOFI 0.0
Internal
hypoth_v1_unigene17148 Hypothalamus v1 873
FL-Next: tr=Yars protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: Tyrosyl-tRNA synthetase 3.811e-16
AutoFact: Tyrosyl-tRNA synthetase, cytoplasmic n=3 Tax=Danio rerio RepID=SYYC_DANRE 0.0
C-terminus
hypoth_v1_unigene17925 Hypothalamus v1 308
FL-Next: tr=Cysteinyl-tRNA synthetase, cytoplasmic; Salmo salar (Atlantic salmon). 0.0
Sma3: Cysteinyl-tRNA synthetase 5.034e-17
AutoFact: cars, sb:cb71; cysteinyl-tRNA synthetase (EC:6.1.1.16); K01883 cysteinyl-tRNA synthetase [EC:6.1.1.16] 4.0e-26
C-terminus
hypoth_v1_unigene19251 Hypothalamus v1 331
FL-Next: tr=Phenylalanyl-tRNA synthetase alpha chain; Salmo salar (Atlantic salmon). 0.0
Sma3: PheRS 1.726e-19
AutoFact: Phenylalanyl-tRNA synthetase alpha chain n=1 Tax=Salmo salar RepID=B5X2Q7_SALSA 1.0e-37
Internal
hypoth_v1_unigene24091 Hypothalamus v1 245
FL-Next: tr=Multisynthetase complex auxiliary component p43; Anoplopoma fimbria (Sablefish). 0.0
Sma3: Multisynthetase complex auxiliary component p43 1.86e-06
AutoFact: Unassigned protein
C-terminus
hypoth_v1_unigene24499 Hypothalamus v1 194
FL-Next: tr=Multisynthetase complex auxiliary component p43; Anoplopoma fimbria (Sablefish). 0.0
Sma3: Aminoacyl tRNA synthetase complex-interacting multifunctional protein 1 1.096e-19
AutoFact: Multisynthetase complex auxiliary component p43 n=1 Tax=Anoplopoma fimbria RepID=C3KIH3_ANOFI 3.0e-15
N-terminus
hypoth_v1_unigene28311 Hypothalamus v1 164
FL-Next: tr=tRNA (Guanine-n(7)-)-methyltransferase b; Ictalurus punctatus (Channel catfish). 0.0
Sma3: tRNA (guanine(46)-N(7))-methyltransferase 8.517e-15
AutoFact: tRNA (Guanine-n(7)-)-methyltransferase b n=1 Tax=Ictalurus punctatus RepID=E3TE09_ICTPU 3.0e-20
Internal
hypoth_v1_unigene29743 Hypothalamus v1 189
FL-Next: tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: Cysteinyl-tRNA synthetase 1.853e-21
AutoFact: Cysteinyl-tRNA synthetase, cytoplasmic n=1 Tax=Salmo salar RepID=B5X1G4_SALSA 2.0e-18
Internal
hypoth_v1_unigene29770 Hypothalamus v1 149
FL-Next: tr=Uncharacterized protein; Gallus gallus (Chicken). 0.0
AutoFact: eif2ak4, GCN2; eukaryotic translation initiation factor 2 alpha kinase 4; K08860 eukaryotic translation initiation factor 2-alpha kinase [EC:2.7.11.1] 2.0e-08
Internal
hypoth_v1_unigene30564 Hypothalamus v1 458
FL-Next: sp=Cytoplasmic tRNA 2-thiolation protein 1; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: ATP-binding domain-containing protein 3 3.051e-14
AutoFact: Cytoplasmic tRNA 2-thiolation protein 1 n=3 Tax=Clupeocephala RepID=CTU1_DANRE 0.0
Internal
hypoth_v1_unigene35950 Hypothalamus v1 204
Sma3: Zgc:154081 5.115e-06
Coding
hypoth_v1_unigene41144 Hypothalamus v1 174
FL-Next: tr=Phenylalanyl-tRNA synthetase alpha chain; Salmo salar (Atlantic salmon). 0.0
Sma3: PheRS 2.149e-14
AutoFact: Phenylalanyl-tRNA synthetase alpha chain n=1 Tax=Salmo salar RepID=B5X2Q7_SALSA 2.0e-12
Internal
hypoth_v1_unigene45646 Hypothalamus v1 233
FL-Next: tr=Phenylalanyl-tRNA synthetase alpha chain; Salmo salar (Atlantic salmon). 0.0
Sma3: Phenylalanyl-tRNA synthetase alpha chain 7.595e-06
AutoFact: Phenylalanyl-tRNA synthetase alpha chain n=1 Tax=Salmo salar RepID=B5X2Q7_SALSA 7.0e-21
N-terminus

Go to Annotations List

Juntadeandalucia

IFAPA Centro El Toruño. Ctra. N. IV Km. 654a. Camino de Tiro Pichón. El Puerto de Santa María (Cádiz), Spain.
Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29590 Campanillas (Málaga), Spain