SoleaDB

Assembly Name: Hypothalamus v1

Name: negative regulation of transcription from RNA polymerase II promoter

Term: GO:0000122 Help

Source: GO from Sma3

Ontology: Biological Process

UniGenes with this annotation:

Sequence

Assembly

Length (nt)

Description

E-value

Full-Length

136

• FL-Next: tr=Chromosome 1 SCAF15008, whole genome shotgun sequence; Tetraodon nigroviridis (Green puffer).	0.0
• Sma3: Transcription factor SOX-3	4.811e-10
• AutoFact: Transcription factor Sox-3 n=10 Tax=Actinopteri RepID=SOX3_DANRE	9.0e-05

C-terminus

400

• FL-Next: tr=Transcription factor Sox1a; Takifugu rubripes (Japanese pufferfish) (Fugu rubripes).	0.0
• Sma3: Transcription factor SOX-3	1.116e-09
• AutoFact: Transcription factor Sox-1a n=3 Tax=Clupeocephala RepID=SOX1A_DANRE	7.0e-16

C-terminus

184

• FL-Next: tr=Chromosome 8 SCAF14759, whole genome shotgun sequence; Tetraodon nigroviridis (Green puffer).	0.0
• Sma3: Protein odd-skipped-related 1	2.095e-09
• AutoFact: Protein odd-skipped-related 2 n=5 Tax=Simiiformes RepID=OSR2_HUMAN	2.0e-22

C-terminus

251

• FL-Next: tr=Sox3; Lates calcarifer (Barramundi).	0.0
• Sma3: Transcription factor Sox-2	2.085e-13
• AutoFact: Transcription factor Sox3 n=1 Tax=Takifugu rubripes RepID=Q6WNU0_TAKRU	2.0e-38

Internal

327

• FL-Next: tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio).	0.0
• Sma3: SET and MYND domain-containing protein 2B	9.563e-10
• AutoFact: N-lysine methyltransferase SMYD2-A n=2 Tax=Danio rerio RepID=SMY2A_DANRE	3.99931e-42

Internal