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Assembly Name: Hypothalamus v1

Name: IQ motif, EF-hand binding site

Term: IPR000048  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
hypoth_v1_unigene379 Hypothalamus v1 698
• FL-Next: tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
• Sma3: Voltage-gated sodium channel type IV alpha subunit Nav1.4b 0.0
• AutoFact: scn8ab; sodium channel, voltage-gated, type VIII, alpha b; K04840 voltage-gated sodium channel type VIII alpha 0.0
Internal
hypoth_v1_unigene549 Hypothalamus v1 510
• FL-Next: tr=Neurogranin; Gillichthys mirabilis (Long-jawed mudsucker). 0.0
• Sma3: Neurogranin 0.0
• AutoFact: Neurogranin n=2 Tax=Gillichthys RepID=Q90X80_GILMI 5.0e-20
Putative Complete
hypoth_v1_unigene825 Hypothalamus v1 510
• FL-Next: tr=Voltage-gated sodium channel type VIII alpha subunit Nav1.6b; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
• Sma3: Sodium channel protein type 4 subunit alpha A 6.715e-16
• AutoFact: scn8ab; sodium channel, voltage-gated, type VIII, alpha b; K04840 voltage-gated sodium channel type VIII alpha 0.0
Internal
hypoth_v1_unigene2237 Hypothalamus v1 563
• FL-Next: tr=Myo1bl2 protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
• AutoFact: myosin-Ib-like; K10356 myosin I 6.0e-32
C-terminus
hypoth_v1_unigene2537 Hypothalamus v1 455
• FL-Next: tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
• Sma3: Myosin, heavy chain 10, non-muscle 6.333e-13
• AutoFact: myh10, fc46h07, fy19d11, si:dz150i12.3, wu:fc46h07, wu:fy19d11; myosin, heavy polypeptide 10, non-muscle; K10352 myosin heavy chain 6.0e-38
Internal
hypoth_v1_unigene3677 Hypothalamus v1 322
• FL-Next: tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
• Sma3: Ras protein-specific guanine nucleotide-releasing factor 2 1.719e-09
• AutoFact: Ras protein-specific guanine nucleotide-releasing factor 1-like 0.0
C-terminus
hypoth_v1_unigene4158 Hypothalamus v1 767
• FL-Next: tr=Novel protein similar to vertebrate STE20-like kinase (Yeast) (SLK); Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
• Sma3: Serine/threonine-protein kinase 4 9.452e-15
• AutoFact: slkn, im:7150762, si:ch211-223p8.7, wu:fk52g01; STE20-like kinase (yeast) (EC:2.7.11.1); K08836 STE20-like kinase [EC:2.7.11.1] 0.0
Internal
hypoth_v1_unigene4213 Hypothalamus v1 594
• FL-Next: tr=Chromosome 1 SCAF14995, whole genome shotgun sequence; Tetraodon nigroviridis (Green puffer). 0.0
• Sma3: Zgc:153738 4.788e-10
• AutoFact: IQCA1, IQCA; IQ motif containing with AAA domain 1 9.99967e-42
Internal
hypoth_v1_unigene4231 Hypothalamus v1 251
• FL-Next: tr=Chromosome 6 SCAF14737, whole genome shotgun sequence; Tetraodon nigroviridis (Green puffer). 0.0
• Sma3: Ubiquitin protein ligase E3C 9.688e-10
• AutoFact: Isoform 2 of Ubiquitin-protein ligase E3C n=4 Tax=Eutheria RepID=Q15386-2 3.0e-09
N-terminus
hypoth_v1_unigene4482 Hypothalamus v1 255
• FL-Next: tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
• Sma3: Myosin-9 2.463e-08
• AutoFact: Myosin-9 (Fragment) n=1 Tax=Salmo salar RepID=C0PU50_SALSA 2.0e-18
Internal
hypoth_v1_unigene4903 Hypothalamus v1 398
• FL-Next: tr=Novel protein similar to mouse and humanIQ motif containing with AAA domain (IQCA); Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
• AutoFact: similar to IQ motif containing with AAA domain 0.0
Internal
hypoth_v1_unigene6229 Hypothalamus v1 299
• FL-Next: tr=Voltage-gated sodium channel type VIII alpha subunit Nav1.6b; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
• Sma3: Voltage-gated sodium channel type IV alpha subunit Nav1.4b 7.423e-16
• AutoFact: Sodium channel alpha subunit (Fragment) n=5 Tax=Tetraodontidae RepID=Q90519_TAKRU 3.0e-17
Internal
hypoth_v1_unigene7001 Hypothalamus v1 243
• FL-Next: tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
• AutoFact: myo16, si:dkey-241o22.1; myosin XVI 1.0e-20
Internal
hypoth_v1_unigene7327 Hypothalamus v1 561
• FL-Next: tr=Novel serine/threonine kinase protein (Zgc:77029); Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
• Sma3: Serine/threonine-protein kinase 4 1.011e-14
• AutoFact: stk25b, stk25, zgc:56022, zgc:77029; serine/threonine kinase 25b (EC:2.7.11.1); K08839 serine/threonine kinase 25 [EC:2.7.11.22] 0.0
Internal
hypoth_v1_unigene7336 Hypothalamus v1 242
• FL-Next: tr=Novel protein similar to ubiquitin protein ligase E3B (UBE3B); Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
• Sma3: Ubiquitin protein ligase E3B 6.355e-06
• AutoFact: Novel protein similar to ubiquitin protein ligase E3B (UBE3B) n=2 Tax=Clupeocephala RepID=A2BGM8_DANRE 2.0e-06
C-terminus
hypoth_v1_unigene7483 Hypothalamus v1 217
• FL-Next: tr=Voltage-gated sodium channel type VIII alpha subunit Nav1.6b; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
• AutoFact: Sodium channel alpha subunit (Fragment) n=5 Tax=Tetraodontidae RepID=Q90519_TAKRU 3.0e-25
Internal
hypoth_v1_unigene8054 Hypothalamus v1 377
• FL-Next: tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
• Sma3: Myosin XVI 9.575e-10
• AutoFact: myo16, si:dkey-241o22.1; myosin XVI 1.0e-23
Internal
hypoth_v1_unigene8726 Hypothalamus v1 596
• FL-Next: sp=Myosin-Ic; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
• Sma3: Unconventional myosin-Ic 6.931e-14
• AutoFact: MMI-beta, MMIb, Myo1c, Myosin-Ic; si:ch211-69i14.4; K10356 myosin I 0.0
C-terminus
hypoth_v1_unigene10006 Hypothalamus v1 378
• FL-Next: tr=Sodium channel protein Scn8a; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
• Sma3: Voltage-dependent sodium channel SCN3A 2.721e-09
• AutoFact: scn8aa, Nav1.6, scn8a; sodium channel, voltage-gated, type VIII, alpha a; K04840 voltage-gated sodium channel type VIII alpha 2.0e-12
Putative N-terminus
hypoth_v1_unigene10469 Hypothalamus v1 222
• FL-Next: tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
• Sma3: Myosin, heavy chain 10, non-muscle 8.664e-13
• AutoFact: MYH10; myosin, heavy chain 10, non-muscle; K10352 myosin heavy chain 2.0e-30
Internal

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Juntadeandalucia

IFAPA Centro El Toruño. Ctra. N. IV Km. 654a. Camino de Tiro Pichón. El Puerto de Santa María (Cádiz), Spain.
Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29590 Campanillas (Málaga), Spain