Logo_sudoe_cb Cabecera_solea2 Img_right
HomeAssembliesBLASTSearchInstitutions

Assembly Name: Hypothalamus v1

Name: Helix-turn-helix motif

Term: IPR000047  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
hypoth_v1_unigene4461 Hypothalamus v1 371
• FL-Next: tr=Homeobox protein engrailed-2a; Dicentrarchus labrax (European seabass) (Morone labrax). 0.0
• Sma3: Homeobox protein engrailed-2a 6.865e-09
• AutoFact: Homeobox protein engrailed-2a n=3 Tax=Percomorpha RepID=E6ZJ00_DICLA 1.0e-37
C-terminus
hypoth_v1_unigene22593 Hypothalamus v1 170
• FL-Next: tr=Orthopedia protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
• Sma3: Homeobox protein orthopedia B 2.934e-10
• AutoFact: Homeobox protein orthopedia B n=4 Tax=Danio rerio RepID=OTBP_DANRE 4.0e-14
C-terminus
hypoth_v1_unigene29282 Hypothalamus v1 282
• FL-Next: tr=Dlx1a protein; Haplochromis burtoni (Burton's mouthbrooder). 0.0
• Sma3: Homeobox-containing Dlx 5.457e-20
• AutoFact: Homeobox protein Dlx1a n=3 Tax=Euteleostomi RepID=DLX1A_DANRE 2.0e-30
Internal
hypoth_v1_unigene36304 Hypothalamus v1 264
• FL-Next: tr=Dlx2a protein; Haplochromis burtoni (Burton's mouthbrooder). 0.0
• Sma3: Dlx2a 1.415e-18
• AutoFact: dlx2b, dlx5; distal-less homeobox gene 2b 7.0e-28
Internal
hypoth_v1_unigene45607 Hypothalamus v1 216
• FL-Next: tr=Dlx1a protein; Haplochromis burtoni (Burton's mouthbrooder). 0.0
• AutoFact: Homeobox protein Dlx1a n=3 Tax=Euteleostomi RepID=DLX1A_DANRE 2.0e-26
Internal

Go to Annotations List

Juntadeandalucia

IFAPA Centro El Toruño. Ctra. N. IV Km. 654a. Camino de Tiro Pichón. El Puerto de Santa María (Cádiz), Spain.
Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29590 Campanillas (Málaga), Spain