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Assembly Name: Osmoregulation v2.0

Name: tRNA binding

Term: GO:0000049  Help

Source: GO from Sma3

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
cit_v2.0_unigene1292 Osmoregulation v2.0 452
FL-Next: tr=Uncharacterized protein; Xenopus tropicalis (Western clawed frog) (Silurana tropicalis). 0.0
AutoFact: eif2ak4, GCN2; eukaryotic translation initiation factor 2 alpha kinase 4; K08860 eukaryotic translation initiation factor 2-alpha kinase [EC:2.7.11.1] 1.0e-39
C-terminus
cit_v2.0_unigene11458 Osmoregulation v2.0 246
FL-Next: tr=Yars protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: Tyrosine--tRNA ligase, cytoplasmic 5.813e-14
AutoFact: Tyrosyl-tRNA synthetase, cytoplasmic n=3 Tax=Danio rerio RepID=SYYC_DANRE 3.0e-25
Internal
cit_v2.0_unigene13643 Osmoregulation v2.0 322
FL-Next: sp=tRNA wybutosine-synthesizing protein 5; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: tRNA wybutosine-synthesizing protein 5 8.506e-11
AutoFact: MGC154110, im:7148946, m:7148946; zgc:154110 3.0e-37
Internal
cit_v2.0_unigene14035 Osmoregulation v2.0 260
FL-Next: tr=Phenylalanyl-tRNA synthetase alpha chain; Salmo salar (Atlantic salmon). 0.0
Sma3: Phenylalanyl-tRNA synthetase, alpha subunit 6.301e-10
AutoFact: Phenylalanyl-tRNA synthetase alpha chain n=1 Tax=Salmo salar RepID=B5X2Q7_SALSA 5.0e-22
N-terminus
cit_v2.0_unigene16105 Osmoregulation v2.0 1161
FL-Next: tr=Yars protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: Tyrosyl-tRNA synthetase 3.811e-16
AutoFact: Tyrosyl-tRNA synthetase, cytoplasmic n=3 Tax=Danio rerio RepID=SYYC_DANRE 0.0
C-terminus
cit_v2.0_unigene17353 Osmoregulation v2.0 791
FL-Next: tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: tRNA wybutosine-synthesizing protein 5 7.67e-11
AutoFact: MGC154110, im:7148946, m:7148946; zgc:154110 6.0e-33
N-terminus
cit_v2.0_unigene20539 Osmoregulation v2.0 1579
FL-Next: tr=Phenylalanyl-tRNA synthetase alpha chain; Salmo salar (Atlantic salmon). 0.0
Sma3: Uncharacterized protein 0.0
AutoFact: Phenylalanyl-tRNA synthetase alpha chain n=1 Tax=Salmo salar RepID=B5X2Q7_SALSA 0.0
C-terminus
cit_v2.0_unigene23898 Osmoregulation v2.0 1276
FL-Next: tr=Multisynthetase complex auxiliary component p43; Anoplopoma fimbria (Sablefish). 0.0
Sma3: Multisynthetase complex auxiliary component p43 0.0
AutoFact: Multisynthetase complex auxiliary component p43 n=1 Tax=Anoplopoma fimbria RepID=C3KIH3_ANOFI 0.0
Complete
cit_v2.0_unigene30449 Osmoregulation v2.0 266
FL-Next: tr=Cysteinyl-tRNA synthetase, cytoplasmic; Salmo salar (Atlantic salmon). 0.0
Sma3: Cysteinyl-tRNA synthetase 1.853e-21
AutoFact: Cars, CA3; cysteinyl-tRNA synthetase (EC:6.1.1.16); K01883 cysteinyl-tRNA synthetase [EC:6.1.1.16] 6.0e-29
Internal
cit_v2.0_unigene32347 Osmoregulation v2.0 454
FL-Next: tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: Cytoplasmic tRNA 2-thiolation protein 2 1.798e-10
AutoFact: ctu2, ctu2-A, ncs2, ncs2-A, upf0432; cytosolic thiouridylase subunit 2 homolog; K14169 cytoplasmic tRNA 2-thiolation protein 2 8.99998e-41
Internal
cit_v2.0_unigene33870 Osmoregulation v2.0 496
FL-Next: tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: Phenylalanyl-tRNA synthetase, mitochondrial 9.766e-06
AutoFact: Phenylalanyl-tRNA synthetase, mitochondrial n=1 Tax=Salmo salar RepID=C0HB36_SALSA 0.0
Putative Complete
cit_v2.0_unigene35150 Osmoregulation v2.0 323
FL-Next: sp=Cytoplasmic tRNA 2-thiolation protein 1; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: ATP-binding domain-containing protein 3 2.386e-14
AutoFact: Cytoplasmic tRNA 2-thiolation protein 1 n=3 Tax=Clupeocephala RepID=CTU1_DANRE 1.0e-13
Internal
cit_v2.0_unigene36426 Osmoregulation v2.0 541
FL-Next: tr=Phenylalanyl-tRNA synthetase, mitochondrial; Salmo salar (Atlantic salmon). 0.0
AutoFact: Phenylalanyl-tRNA synthetase, mitochondrial n=1 Tax=Salmo salar RepID=C0HB36_SALSA 0.0
Internal
cit_v2.0_unigene45006 Osmoregulation v2.0 356
FL-Next: tr=Uncharacterized protein; Xenopus tropicalis (Western clawed frog) (Silurana tropicalis). 0.0
AutoFact: eif2ak4, GCN2; eukaryotic translation initiation factor 2 alpha kinase 4; K08860 eukaryotic translation initiation factor 2-alpha kinase [EC:2.7.11.1] 9.99967e-42
Internal
cit_v2.0_unigene46809 Osmoregulation v2.0 370
FL-Next: tr=Yars protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: Tyrosine--tRNA ligase, cytoplasmic 8.762e-14
AutoFact: Tyrosyl-tRNA synthetase, cytoplasmic n=3 Tax=Danio rerio RepID=SYYC_DANRE 0.0
Internal
cit_v2.0_unigene53491 Osmoregulation v2.0 348
FL-Next: tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: Cysteinyl-tRNA synthetase 4.431e-17
AutoFact: cars, sb:cb71; cysteinyl-tRNA synthetase (EC:6.1.1.16); K01883 cysteinyl-tRNA synthetase [EC:6.1.1.16] 4.0e-17
C-terminus

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Juntadeandalucia

IFAPA Centro El Toruño. Ctra. N. IV Km. 654a. Camino de Tiro Pichón. El Puerto de Santa María (Cádiz), Spain.
Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29590 Campanillas (Málaga), Spain