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Assembly Name: Osmoregulation v2.0

Name: nucleic acid binding

Term: GO:0003676  Help

Source: GO from Sma3

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
cit_v2.0_unigene6 Osmoregulation v2.0 292
FL-Next: tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: Uncharacterized protein 0.0
AutoFact: Zinc finger, C2H2 type family protein 8.0e-19
C-terminus
cit_v2.0_unigene31 Osmoregulation v2.0 905
FL-Next: tr=Splicing factor arginine/serine-rich 11; Anoplopoma fimbria (Sablefish). 0.0
Sma3: Splicing factor arginine/serine-rich 11 7.449e-14
AutoFact: Splicing factor arginine/serine-rich 11 n=1 Tax=Anoplopoma fimbria RepID=C3KJZ0_ANOFI 0.0
C-terminus
cit_v2.0_unigene49 Osmoregulation v2.0 721
FL-Next: tr=Chromosome 18 SCAF15027, whole genome shotgun sequence; Tetraodon nigroviridis (Green puffer). 0.0
Sma3: Zinc finger protein 827 8.506e-11
AutoFact: ZNF827; zinc finger protein 827 7.0e-36
Internal
cit_v2.0_unigene320 Osmoregulation v2.0 558
FL-Next: tr=Ectonucleotide pyrophosphatase/phosphodiesterase 2; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: Ectonucleotidase enpp3 3.352e-09
AutoFact: ectonucleotide pyrophosphatase/phosphodiesterase 2-like 0.0
Internal
cit_v2.0_unigene331 Osmoregulation v2.0 660
FL-Next: tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: Zic family member 4 1.841e-13
AutoFact: Zic family member 3 heterotaxy 1 (Odd-paired homolog, Drosophila) n=4 Tax=Clupeocephala RepID=Q6PV84_DANRE 0.0
Internal
cit_v2.0_unigene472 Osmoregulation v2.0 301
FL-Next: tr=Chromosome 14 SCAF14590, whole genome shotgun sequence; Tetraodon nigroviridis (Green puffer). 0.0
Sma3: Hnrnpu protein 1.633e-09
AutoFact: hnrnpu, MGC111835, MGC136480, hnrpu, wu:fa66f11, wu:fc18b08, wu:fi89c08, zgc:111835, zgc:136480; heterogeneous nuclear ribonucleoprotein U 6.0e-24
Internal
cit_v2.0_unigene555 Osmoregulation v2.0 399
FL-Next: tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: Unkempt homolog 4.811e-10
AutoFact: PREDICTED: RING finger protein unkempt-like n=1 Tax=Danio rerio RepID=UPI0002026CEB 0.0
Internal
cit_v2.0_unigene589 Osmoregulation v2.0 270
FL-Next: tr=Novel protein similar to vertebrate activating signal cointegrator 1 complex subunit 3-like 1 (ASCC3L1); Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: LOC100127710 protein 8.836e-06
AutoFact: PREDICTED: activating signal cointegrator 1 complex subunit 3-like n=1 Tax=Anolis carolinensis RepID=UPI00020383ED 2.0e-27
Putative C-terminus
cit_v2.0_unigene848 Osmoregulation v2.0 821
FL-Next: tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: Zinc finger and BTB domain containing 2b 1.811e-09
AutoFact: zbtb2b, fc05d08, fc26d04, wu:fc05d08, wu:fc26d04, zbtb2, zgc:56572; zinc finger and BTB domain containing 2b; K10489 zinc finger and BTB domain-containing protein 2 9.80909e-45
Internal
cit_v2.0_unigene889 Osmoregulation v2.0 271
FL-Next: tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: Zgc:175171 1.015e-09
AutoFact: Zgc:175171 protein n=2 Tax=Danio rerio RepID=A9JRY5_DANRE 5.0e-34
C-terminus
cit_v2.0_unigene1013 Osmoregulation v2.0 463
FL-Next: tr=Transcriptional repressor NF-X1; Dicentrarchus labrax (European seabass) (Morone labrax). 0.0
AutoFact: Transcriptional repressor NF-X1 n=1 Tax=Dicentrarchus labrax RepID=E6ZJ69_DICLA 0.0
Internal
cit_v2.0_unigene1080 Osmoregulation v2.0 270
FL-Next: tr=Splicing factor, proline-and glutamine-rich; Salmo salar (Atlantic salmon). 0.0
Sma3: Paraspeckle component 1 3.256e-13
AutoFact: sfpq, hm:zeh0027, wu:fa11h12, wu:fd10f03, zgc:85935; splicing factor proline/glutamine rich (polypyrimidine tract binding protein associated); K13219 splicing factor, proline- and glutamine-rich 2.0e-31
Internal
cit_v2.0_unigene1122 Osmoregulation v2.0 321
FL-Next: tr=Chromosome 16 SCAF15113, whole genome shotgun sequence; Tetraodon nigroviridis (Green puffer). 0.0
Sma3: Uncharacterized protein 4.315e-38
AutoFact: zinc finger protein 135-like 2.0e-28
Internal
cit_v2.0_unigene1147 Osmoregulation v2.0 284
FL-Next: tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: Probable helicase with zinc finger domain 7.44e-06
AutoFact: helz, wu:fd51f08; zgc:77407 (EC:3.6.1.-) 8.96831e-44
Internal
cit_v2.0_unigene1162 Osmoregulation v2.0 197
Sma3: Transformer-2 alpha 7.401e-10
AutoFact: PRP38_assoc domain containing protein 6.0e-05
unknown
cit_v2.0_unigene1231 Osmoregulation v2.0 677
FL-Next: tr=Uncharacterized protein; Danio rerio (Zebrafish) (Brachydanio rerio). 0.0
Sma3: MTr1 1.675e-10
AutoFact: Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1 n=2 Tax=Danio rerio RepID=MTR1_DANRE 0.0
C-terminus
cit_v2.0_unigene1275 Osmoregulation v2.0 936
Sma3: Zinc finger, RAN-binding domain containing 2 6.248e-13
AutoFact: DUF1777 multi-domain protein 2.0e-12
Putative coding
cit_v2.0_unigene1282 Osmoregulation v2.0 316
FL-Next: tr=Chromosome 16 SCAF15113, whole genome shotgun sequence; Tetraodon nigroviridis (Green puffer). 0.0
Sma3: Uncharacterized protein 1.196e-26
AutoFact: zinc finger protein 345-like 1.0e-22
C-terminus
cit_v2.0_unigene1346 Osmoregulation v2.0 330
FL-Next: tr=Nucleolar protein 8; Dicentrarchus labrax (European seabass) (Morone labrax). 0.0
Sma3: Si:ch211-103f16.2 1.194e-10
AutoFact: Nucleolar protein 8 n=1 Tax=Dicentrarchus labrax RepID=E6ZGF4_DICLA 3.0e-40
Internal
cit_v2.0_unigene1405 Osmoregulation v2.0 293
FL-Next: tr=Krueppel-like factor 6; Dicentrarchus labrax (European seabass) (Morone labrax). 0.0
Sma3: Krueppel-like factor 6 2.08e-21
AutoFact: Krueppel-like factor 6 n=3 Tax=Percomorpha RepID=E6ZI74_DICLA 0.0
C-terminus

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Juntadeandalucia

IFAPA Centro El Toruño. Ctra. N. IV Km. 654a. Camino de Tiro Pichón. El Puerto de Santa María (Cádiz), Spain.
Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29590 Campanillas (Málaga), Spain