Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Listing Internal UniGenes


All unigenes | Annotated unigenes | Download Internal sequences Help


Help Complete | Putative Complete | N-terminus | Putative N-terminus | Internal | Putative Internal | C-terminus | Putative C-terminus | Coding | Putative Coding | More



Search: Containing in

Name Length
SoftwareDescriptionE-value
FL-next Status Origin of reads
sp_v3.0_unigene63 689
• AutoFact
Retrotrans_gag domain containing protein
2.0e-06
• FL-Next
tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida).
0.0
• Sma3
None-
Internal
sp_v3.0_unigene64 700
• AutoFact
DUF2046 multi-domain protein
8.0e-08
• FL-Next
sp=Lipoxygenase; Glycine max (Soybean) (Glycine hispida).
0.0
• Sma3
None-
Internal
sp_v3.0_unigene71 2227
• AutoFact
callose synthase 1 [Arabidopsis thaliana] sp|Q9AUE0.2|CALS1_ARATH RecName: Full=Callose synthase 1; AltName: Full=1,3-beta-glucan synthase; AltName: Full=Protein GLUCAN SYNTHASE-LIKE 6 gb|AEE27855.1| callose synthase 1 [Arabidopsis thaliana]
0.0
• FL-Next
sp=Callose synthase 3; Arabidopsis thaliana (Mouse-ear cress).
0.0
• Sma3
1,3-beta-glucan synthase
1.269e-27
Internal
sp_v3.0_unigene113 1649
• AutoFact
Set domain protein, putative n=1 Tax=Ricinus communis RepID=B9S8S4_RICCO
0.0
• FL-Next
sp=Histone-lysine N-methyltransferase SUVR5; Arabidopsis thaliana (Mouse-ear cress).
0.0
• Sma3
None-
Internal
sp_v3.0_unigene226 1404
• AutoFact
pfam07899, Frigida, Frigida-like protein
0.0
• FL-Next
tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
0.0
• Sma3
None-
Internal
sp_v3.0_unigene227 786
• AutoFact
Pseudouridylate synthase/ transporter n=1 Tax=Zea mays RepID=B6TRU2_MAIZE
0.0
• FL-Next
sp=H/ACA ribonucleoprotein complex subunit 4; Arabidopsis thaliana (Mouse-ear cress).
0.0
• Sma3
None-
Internal
sp_v3.0_unigene269 725
• AutoFact
ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9SDJ7_RICCO
0.0
• FL-Next
sp=Putative uncharacterized protein At4g01020, chloroplastic; Arabidopsis thaliana (Mouse-ear cress).
0.0
• Sma3
ATP-dependent RNA helicase, putative
3.148e-11
Internal
sp_v3.0_unigene277 650
• AutoFact
Ubiquitin-protein ligase-like protein n=1 Tax=Pyrus communis RepID=A4ZV36_PYRCO
9.00054e-42
• FL-Next
tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
0.0
• Sma3
None-
Internal
sp_v3.0_unigene278 991
• AutoFact
clathrin interactor EPSIN 2 [Arabidopsis thaliana] ref|NP_850387.1| clathrin interactor EPSIN 2 [Arabidopsis thaliana] ref|NP_973675.1| clathrin interactor EPSIN 2 [Arabidopsis thaliana] sp|Q67YI9.1|EPN2_ARATH RecName: Full=Clathrin interactor EPSIN 2; Al
0.0
• FL-Next
tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
0.0
• Sma3
None-
Internal
sp_v3.0_unigene337 678
• AutoFact
Putative TIR-NBS-LRR protein n=1 Tax=Pinus monticola RepID=E9NZS6_PINMO
2.0e-24
• FL-Next
tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
0.0
• Sma3
None-
Internal
sp_v3.0_unigene357 470
• AutoFact
Kinesin light chain, putative n=1 Tax=Ricinus communis RepID=B9RB32_RICCO
9.0e-39
• FL-Next
tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
0.0
• Sma3
Kinesin light chain, putative
8.543e-15
Internal
sp_v3.0_unigene359 819
• AutoFact
ethylene-responsive transcription factor WRI1 [Arabidopsis thaliana] gb|AEE79213.1| ethylene-responsive transcription factor WRI1 [Arabidopsis thaliana]
0.0
• FL-Next
tr=AINTEGUMENTA-like protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana).
0.0
• Sma3
AP2 domain-containing transcription factor
0.0
Internal
sp_v3.0_unigene371 871
• AutoFact
Phosphatidylinositol N-acetylglucosaminyltransferase, putative n=1 Tax=Ricinus communis RepID=B9SVS0_RICCO
8.0e-06
• FL-Next
tr=Putative uncharacterized protein; Vitis vinifera (Grape).
0.0
• Sma3
None-
Internal
sp_v3.0_unigene372 1132
• AutoFact
ABC transporter family protein n=1 Tax=Populus trichocarpa RepID=B9ID16_POPTR
0.0
• FL-Next
sp=ABC transporter B family member 28; Arabidopsis thaliana (Mouse-ear cress).
0.0
• Sma3
None-
Internal
sp_v3.0_unigene378 1100
• AutoFact
phototropic-responsive NPH3-like protein [Arabidopsis thaliana] ref|NP_974103.1| phototropic-responsive NPH3-like protein [Arabidopsis thaliana] ref|NP_001185347.1| phototropic-responsive NPH3-like protein [Arabidopsis thaliana] sp|Q9C9V6.1|Y1790_ARATH Re
0.0
• FL-Next
tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
0.0
• Sma3
Signal transducer, putative
4.808e-10
Internal
sp_v3.0_unigene410 1077
• AutoFact
Tesmin/TSO1-like CXC domain-containing protein [Arabidopsis thaliana] emb|CAB43914.1| putative transcription factor [Arabidopsis thaliana] emb|CAB79658.1| putative transcription factor [Arabidopsis thaliana] dbj|BAC43254.1| putative transcription factor [
0.0
• FL-Next
sp=Protein tesmin/TSO1-like CXC 5; Arabidopsis thaliana (Mouse-ear cress).
0.0
• Sma3
Tesmin-like
1.902e-09
Internal
sp_v3.0_unigene459 1348
• AutoFact
Retinitis pigmentosa GTPase regulator-like protein (Fragment) n=1 Tax=Takifugu rubripes RepID=Q9DGL1_TAKRU
1.0e-07
• FL-Next
tr=Singapore isolate B (sub-type 7) whole genome shotgun sequence assembly, scaffold_1; Blastocystis hominis.
0.0
• Sma3
None-
Internal
sp_v3.0_unigene516 1313
• AutoFact
Beta-galactosidase 17 n=3 Tax=Arabidopsis RepID=BGA17_ARATH
0.0
• FL-Next
sp=Beta-galactosidase; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
0.0
• Sma3
Beta-galactosidase
4.759e-08
Internal
sp_v3.0_unigene546 3546
• AutoFact
Ubiquitin carboxyl-terminal hydrolase-related protein [Arabidopsis thaliana] gb|AEC08021.1| Ubiquitin carboxyl-terminal hydrolase-related protein [Arabidopsis thaliana]
4.0e-10
• FL-Next
tr=Putative uncharacterized protein; Vitis vinifera (Grape).
0.0
• Sma3
None-
Internal
sp_v3.0_unigene589 528
• AutoFact
glycosyltransferase family 29 (sialyltransferase) protein [Arabidopsis thaliana] gb|AAL85966.1| unknown protein [Arabidopsis thaliana] gb|AAM91750.1| unknown protein [Arabidopsis thaliana] gb|AEE78459.1| glycosyltransferase family 29 (sialyltransferase) p
0.0
• FL-Next
tr=Putative uncharacterized protein; Vitis vinifera (Grape).
0.0
• Sma3
Sialyltransferase-like protein
1.582e-28
Internal


Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain