Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Listing Internal UniGenes


All unigenes | Annotated unigenes | Download Internal sequences Help


Help Complete | Putative Complete | N-terminus | Putative N-terminus | Internal | Putative Internal | C-terminus | Putative C-terminus | Coding | Putative Coding | More



Search: Containing in

Name Length
SoftwareDescriptionE-value
FL-next Status Origin of reads
sp_v3.0_unigene5806 1838
• AutoFact
putative mitogen-activated protein kinase 1 [Medicago sativa]
0.0
• FL-Next
tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
0.0
• Sma3
Mitogen activated protein kinase kinase kinase 3, mapkkk3, mekk3, putative
2.898e-13
Internal
sp_v3.0_unigene5840 1716
• AutoFact
acetyl-CoA carboxylase [Jatropha curcas]
0.0
• FL-Next
sp=Acetyl-CoA carboxylase 1; Arabidopsis thaliana (Mouse-ear cress).
0.0
• Sma3
Acetyl-CoA carboxylase
1.676e-22
Internal
sp_v3.0_unigene5860 2478
• AutoFact
Viral A-type inclusion protein, putative n=1 Tax=Trichomonas vaginalis RepID=A2FD36_TRIVA
6.0e-28
• FL-Next
sp=Putative WEB family protein At1g65010, chloroplastic; Arabidopsis thaliana (Mouse-ear cress).
0.0
• Sma3
None-
Internal
sp_v3.0_unigene5862 1238
• AutoFact
pfam01476, LysM, LysM domain
9.0e-09
• FL-Next
tr=Predicted protein; Physcomitrella patens subsp. patens (Moss).
0.0
• Sma3
None-
Internal
sp_v3.0_unigene5914 1852
• AutoFact
RNA helicase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SLN9_PHYPA
0.0
• FL-Next
sp=Probable RNA helicase SDE3; Arabidopsis thaliana (Mouse-ear cress).
0.0
• Sma3
Putative uncharacterized protein RHEL902
2.437e-06
Internal
sp_v3.0_unigene5931 1200
• AutoFact
Low-phosphate root 1 n=6 Tax=Arabidopsis RepID=A5X8Y8_ARATH
0.0
• FL-Next
tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
0.0
• Sma3
Putative spore coat protein
9.952e-21
Internal
sp_v3.0_unigene5956 1614
• AutoFact
2-methyl-3-buten-2-ol synthase n=1 Tax=Pinus sabiniana RepID=F5CJS6_9CONI
9.0e-13
• FL-Next
tr=2-methyl-3-buten-2-ol synthase; Pinus pseudostrobus var. estevezii.
0.0
• Sma3
None-
Internal
sp_v3.0_unigene6032 1374
• AutoFact
Unassigned protein
0.0
• FL-Next
tr=Putative uncharacterized protein; Vitis vinifera (Grape).
0.0
• Sma3
Eukaryotic translation initiation factor 3 subunit, putative
1.934e-10
Internal
sp_v3.0_unigene6082 1983
• AutoFact
pfam00443, UCH, Ubiquitin carboxyl-terminal hydrolase
8.0e-34
• FL-Next
sp=Ubiquitin carboxyl-terminal hydrolase 23; Arabidopsis thaliana (Mouse-ear cress).
0.0
• Sma3
None-
Internal
sp_v3.0_unigene6084 1973
• AutoFact
SMC_N multi-domain protein
5.0e-11
• FL-Next
sp=WEB family protein At4g27595, chloroplastic; Arabidopsis thaliana (Mouse-ear cress).
0.0
• Sma3
Ubiquitin-protein ligase BRE1A, putative
6.823e-06
Internal
sp_v3.0_unigene6143 1103
• AutoFact
putative S-locus protein kinase [Arabidopsis thaliana] sp|O64776.2|Y1144_ARATH RecName: Full=G-type lectin S-receptor-like serine/threonine-protein kinase At1g61440; Flags: Precursor gb|AEE33838.1| putative S-locus protein kinase [Arabidopsis thaliana]
2.0e-10
• FL-Next
tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
0.0
• Sma3
None-
Internal
sp_v3.0_unigene6195 1028
• AutoFact
Unassigned protein
0.0
• FL-Next
tr=Predicted protein; subsp. trichocarpa).
0.0
• Sma3
None-
Internal
sp_v3.0_unigene6245 1552
• AutoFact
Unassigned protein
0.0
• FL-Next
tr=Nucleotide binding protein, putative; Ricinus communis (Castor bean).
0.0
• Sma3
Chromosome undetermined scaffold_245, whole genome shotgun sequence
6.198e-08
Internal
sp_v3.0_unigene6302 957
• AutoFact
Potassium channel AKT1, putative n=1 Tax=Ricinus communis RepID=B9STQ4_RICCO
1.0e-11
• FL-Next
sp=Probable potassium channel AKT5; Arabidopsis thaliana (Mouse-ear cress).
0.0
• Sma3
None-
Internal
sp_v3.0_unigene6321 1377
• AutoFact
PHD-finger, putative [Oryza sativa Japonica Group] gb|ABA92921.1| PHD-finger family protein, expressed [Oryza sativa Japonica Group]
4.0e-17
• FL-Next
tr=Putative uncharacterized protein; Vitis vinifera (Grape).
0.0
• Sma3
Putative uncharacterized protein At5g16680
3.411e-06
Internal
sp_v3.0_unigene6341 1682
• AutoFact
Transketolase, putative n=1 Tax=Ricinus communis RepID=B9T0B2_RICCO
0.0
• FL-Next
tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
0.0
• Sma3
Transketolase
0.0
Internal
sp_v3.0_unigene6395 1549
• AutoFact
ubiquitin-protein ligase 1 [Arabidopsis thaliana]
0.0
• FL-Next
sp=E3 ubiquitin-protein ligase UPL1; Arabidopsis thaliana (Mouse-ear cress).
0.0
• Sma3
E3 ubiquitin protein ligase upl2, putative
6.271e-09
Internal
sp_v3.0_unigene6435 1247
• AutoFact
NYN domain containing protein
5.0e-20
• FL-Next
tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
0.0
• Sma3
Putative uncharacterized protein At2g15560
7.315e-10
Internal
sp_v3.0_unigene6530 1004
• AutoFact
PMG multi-domain protein
9.0e-07
• FL-Next
tr=Putative uncharacterized protein; Vitis vinifera (Grape).
0.0
• Sma3
None-
Internal
sp_v3.0_unigene6737 1078
• AutoFact
Myosin_tail_1 multi-domain protein
2.0e-10
• FL-Next
sp=Uncharacterized protein At4g38062; Arabidopsis thaliana (Mouse-ear cress).
0.0
• Sma3
None-
Internal


Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain