Sustainpine_db
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Assembly Name: SustainPine v2.0

Listing Internal UniGenes

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Help Complete | Putative Complete | N-terminus | Putative N-terminus | Internal | Putative Internal | C-terminus | Putative C-terminus | Coding | Putative Coding | More


Search: Containing in

Name Length
SoftwareDescriptionE-value
 FL-next Status Origin of reads
sp_v2.0_unigene195 1844
• AutoFact
pfam06470, SMC_hinge, SMC proteins Flexible Hinge Domain
 1.0e-22
• Blast2go
condensin complex components subunit
 0.0
• FL-Next
sp=Structural maintenance of chromosomes protein 2-2; Arabidopsis thaliana (Mouse-ear cress).
0.0
Internal
Biogeco1 v2
Biogeco2 v2
Biogeco3 v1
Uagpf v2
Uma v2
sp_v2.0_unigene254 2314
• AutoFact
PWWP domain-containing protein [Arabidopsis thaliana] ref|NP_001078128.1| PWWP domain-containing protein [Arabidopsis thaliana] gb|AAF23297.1|AC016661_22 hypothetical protein [Arabidopsis thaliana] gb|AEE74795.1| PWWP domain-containing protein [Arabidopsi
 2.0e-38
• Blast2go
pwwp domain-containing protein
 9.711e-43
• FL-Next
sp=Serine/threonine-protein kinase ATM; Arabidopsis thaliana (Mouse-ear cress).
0.0
Internal
Biogeco1 v2
Biogeco2 v2
Biogeco3 v1
Uagpf v2
Uma v2
sp_v2.0_unigene308 1904
• AutoFact
Contains similarity to ubiquitin carboxyl-terminal hydrolase 14 gb|Z35927 from S. cerevisiae [Arabidopsis thaliana]
 0.0
• Blast2go
ubiquitin-protein ligase 1
 0.0
• FL-Next
sp=E3 ubiquitin-protein ligase UPL2; Arabidopsis thaliana (Mouse-ear cress).
0.0
Internal
Biogeco1 v2
Biogeco2 v2
Biogeco3 v1
Uma v2
sp_v2.0_unigene321 1328
• AutoFact
carboxypeptidase C [Arabidopsis thaliana] sp|Q8L7B2.2|SCP20_ARATH RecName: Full=Serine carboxypeptidase-like 20; Flags: Precursor gb|AEE83202.1| carboxypeptidase C [Arabidopsis thaliana]
 0.0
• Blast2go
serine carboxypeptidase-like protein
 0.0
• FL-Next
tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
0.0
Internal
Biogeco1 v2
Biogeco3 v1
Uma v2
sp_v2.0_unigene552 1028
• AutoFact
Noc2p family protein [Arabidopsis thaliana] dbj|BAE98878.1| hypothetical protein [Arabidopsis thaliana] gb|AEE79394.1| Noc2p family protein [Arabidopsis thaliana]
 0.0
• Blast2go
nucleolar complex protein 2 homolog
 0.0
• FL-Next
sp=Nucleolar complex protein 2 homolog; Arabidopsis thaliana (Mouse-ear cress).
0.0
Internal
Biogeco1 v2
Biogeco3 v1
Uma v2
sp_v2.0_unigene561 1006
• AutoFact
Unassigned protein
 0.0
• Blast2go
uncharacterized protein
 4.38987e-31
• FL-Next
tr=Expressed protein; Oryza sativa subsp. japonica (Rice).
0.0
Internal
Biogeco1 v2
Biogeco2 v2
Biogeco3 v1
Uagpf v2
Uma v2
sp_v2.0_unigene600 1068
• AutoFact
[J] COG5192 GTP-binding protein required for 40S ribosome biogenesis
 0.0
• Blast2go
ribosome biogenesis protein bms1 homolog
 0.0
• FL-Next
tr=Putative uncharacterized protein; Vitis vinifera (Grape).
0.0
Internal
Biogeco1 v2
Biogeco2 v2
Biogeco3 v1
Uagpf v2
Uma v2
sp_v2.0_unigene645 4499
• AutoFact
Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein [Arabidopsis thaliana] ref|NP_001117233.1| Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein [Arabidopsis thaliana] gb|AAF79721.1|AC005106_2 T25N20.3 [Arabidopsis
0.0
• Blast2go
None-
• FL-Next
tr=Putative uncharacterized protein; Vitis vinifera (Grape).
0.0
Internal
Inia v1
Biogeco1 v2
Biogeco2 v2
Biogeco3 v1
Uagpf v2
Uma v2
sp_v2.0_unigene687 1484
• AutoFact
PREDICTED: similar to SNF2 domain-containing protein / helicase domain-containing protein / RING finger domain-containing protein n=1 Tax=Vitis vinifera RepID=UPI00019843BD
 0.0
• Blast2go
atp-dependent helicase rhp16-like
 0.0
• FL-Next
sp=Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 3; Arabidopsis thaliana (Mouse-ear cress).
0.0
Internal
Biogeco1 v2
Biogeco3 v1
Uma v2
sp_v2.0_unigene790 851
• AutoFact
putative kinase-like protein TMKL1 [Arabidopsis thaliana] sp|P33543.1|TMKL1_ARATH RecName: Full=Putative kinase-like protein TMKL1; Flags: Precursor emb|CAA51385.1| TMKL1 [Arabidopsis thaliana] dbj|BAB01215.1| receptor kinase [Arabidopsis thaliana] gb|AAM
 0.0
• Blast2go
kinase-like protein tmkl1-like
 0.0
• FL-Next
tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
0.0
Internal
Biogeco1 v2
Biogeco3 v1
Uagpf v2
Uma v2
sp_v2.0_unigene820 1504
• AutoFact
VPS9 domain containing protein
 1.0e-07
• Blast2go
protein
 0.0
• FL-Next
tr=Predicted protein; Physcomitrella patens subsp. patens (Moss).
0.0
Internal
Biogeco1 v2
Biogeco2 v2
Biogeco3 v1
Uagpf v2
Uma v2
sp_v2.0_unigene869 856
• AutoFact
pfkB-like carbohydrate kinase family protein [Arabidopsis thaliana] gb|AAK96546.1| AT4g27600/T29A15_90 [Arabidopsis thaliana] gb|AAL31151.1| AT4g27600/T29A15_90 [Arabidopsis thaliana] gb|AEE85364.1| pfkB-like carbohydrate kinase family protein [Arabidopsi
 0.0
• Blast2go
carbohydrate kinase-like protein
 0.0
• FL-Next
tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
0.0
Internal
Biogeco1 v2
Biogeco3 v1
Uma v2
sp_v2.0_unigene892 1533
• AutoFact
WS03917.C21_O15 SS-B-24 Picea sitchensis cDNA clone WS03917_O15 3', mRNA sequence.
 0.0
• Blast2go
agenet domain containing protein expressed
 4.07032e-27
• FL-Next
tr=Putative uncharacterized protein; Vitis vinifera (Grape).
0.0
Internal
Biogeco1 v2
Biogeco3 v1
Uagpf v2
Uma v2
sp_v2.0_unigene898 2558
• AutoFact
pfam00931, NB-ARC, NB-ARC domain
 4.0e-10
• Blast2go
disease resistance protein at4g27190-like
 5.11316e-20
• FL-Next
tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
0.0
Internal
Inia v1
Biogeco1 v2
Biogeco3 v1
Uagpf v2
Uma v2
sp_v2.0_unigene915 1614
• AutoFact
2-methyl-3-buten-2-ol synthase n=1 Tax=Pinus sabiniana RepID=F5CJS6_9CONI
 5.0e-12
• Blast2go
linalool synthase
 1.03489e-11
• FL-Next
tr=2-methyl-3-buten-2-ol synthase; Pinus sabiniana.
0.0
Internal
Biogeco1 v2
Biogeco2 v2
Biogeco3 v1
Uma v2
sp_v2.0_unigene925 1306
• AutoFact
WS02760.CR_M13 SS-IL-A-FL-14 Picea sitchensis cDNA clone WS02760_M13 3', mRNA sequence.
 0.0
• Blast2go
protein kiaa0664 homolog
 0.0
• FL-Next
tr=Putative uncharacterized protein; Vitis vinifera (Grape).
0.0
Internal
Biogeco1 v2
Biogeco3 v1
Uma v2
sp_v2.0_unigene965 1630
• AutoFact
Leucine-rich repeat transmembrane protein kinase, putative n=1 Tax=Ricinus communis RepID=B9RBW0_RICCO
 0.0
• Blast2go
probable lrr receptor-like serine threonine-protein kinase at1g12460-like
 0.0
• FL-Next
tr=Somatic embryogenesis receptor-like kinase 1; Araucaria angustifolia.
0.0
Internal
Inia v1
Biogeco1 v2
Biogeco3 v1
Uagpf v2
Uma v2
sp_v2.0_unigene1063 972
• AutoFact
DDT domain-containing protein [Arabidopsis thaliana] gb|AED91331.1| DDT domain-containing protein [Arabidopsis thaliana]
 1.4013e-45
• Blast2go
nucleosome chromatin assembly factor group
 0.0
• FL-Next
tr=Putative uncharacterized protein; Vitis vinifera (Grape).
0.0
Internal
Biogeco1 v2
Biogeco2 v2
Biogeco3 v1
Uma v2
sp_v2.0_unigene1066 1291
• AutoFact
pfam00300, His_Phos_1, Histidine phosphatase superfamily (branch 1)
 1.0e-25
• Blast2go
fructose- -bisphosphatase
 0.0
• FL-Next
tr=Putative uncharacterized protein; Vitis vinifera (Grape).
0.0
Internal
Biogeco1 v2
Biogeco2 v2
Biogeco3 v1
Uagpf v2
Uma v2
sp_v2.0_unigene1094 1360
• AutoFact
eukaryotic translation initiation factor SUI1-like protein [Arabidopsis thaliana] dbj|BAE99137.1| hypothetical protein [Arabidopsis thaliana] gb|AEE35192.1| eukaryotic translation initiation factor SUI1-like protein [Arabidopsis thaliana]
 0.0
• Blast2go
eukaryotic translation initiation factor 2d-like
 0.0
• FL-Next
tr=Os02g0557600 protein; Oryza sativa subsp. japonica (Rice).
0.0
Internal
Inia v1
Biogeco1 v2
Biogeco3 v1
Uma v2


Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain