SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene91027

Length: 936 nt

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene91027

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Expansin n=5 Tax=Pinaceae RepID=Q9SWY1_PINTA	-	-	85%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	91%
Blast2go	alpha-expansin 8	-	-	91%

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: coniferopsida.fasta

Fln subject: B8LMF3

Fln msg: your sequence is shorter than subject: 230 - 250

Fln protein: IDSSWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLTCGACYEMKCNDETDPRWCLPGTVTVTATNFCPPNYALANDNGGWCNPPLQHFDMAQPAFQQIGIYKGGIIPIMFRRVPCVRKGGVRFTINGHSYFNLVLITNVGGAGDVEAVSIKGSNTGWQEMSRNWGQNWQSNSYLNGQSLCFKVTTSDGRTTVSYNVAPSNWQFGQTFEGREI*

Protein Length: 231

Fln nts: CAATAGATAGCAGCTGGCAATCCGCGCATGCTACGTTTTATGGTGGCAGCGACGCTTCGGGCACAATGGGAGGTGCGTGCGGCTACGGTAATTTGTATAGTCAAGGGTACGGGACAAACACCGCTGCTCTGAGCACCGCGCTTTTCAACAATGGGCTTACTTGCGGTGCCTGCTACGAAATGAAATGCAACGATGAGACGGATCCTCGGTGGTGTTTACCTGGCACTGTCACTGTTACGGCTACCAACTTTTGCCCACCGAATTATGCACTTGCCAATGATAACGGAGGATGGTGCAATCCACCTCTCCAACACTTCGACATGGCTCAACCTGCTTTTCAACAGATTGGCATTTACAAGGGTGGCATTATTCCCATAATGTTCCGAAGAGTACCATGTGTGAGGAAGGGAGGAGTTCGATTCACAATCAATGGGCACTCCTACTTCAATTTGGTACTCATTACCAACGTAGGAGGTGCAGGCGATGTGGAGGCCGTTTCCATTAAAGGTTCCAACACTGGTTGGCAGGAAATGTCACGCAACTGGGGACAGAATTGGCAAAGCAATTCCTACCTCAACGGCCAGAGCCTTTGCTTCAAGGTCACCACCAGTGATGGCAGGACAACTGTTTCGTATAACGTCGCTCCTTCTAACTGGCAATTTGGCCAGACTTTCGAAGGCAGGGAAATTTAA___CACGAGAAATCAGAGAGAACGAGATGGTAACGAATGTTGCCGCATATTTACCATTTATTCGAGTTGACGAGGTTGCTTTATCAGTATTGGCACCCGCTCCTCTTCACTATGCCATTTATTTTAGCCGAAGTGTTTGAAGTATTCGCTTTTACGTATACAATAGATTAGATTAGGGAAGGTTCCTACGCCGCATGCTAGAGGTAAATATATGGGCGAATATCCAACTAGGAACAGAATCAATATG

Fln Alignment:

sp_v1.1_unigene91027___IDSSWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLTCGACYEMKCNDETDPRWCLPGTVTVTATNFCPPNYALANDNGGWCNPPLQHFDMAQPAFQQIGIYKGGIIPIMFRRVPCVRKGGVRFTINGHSYFNLVLITNVGGAGDVEAVSIKGSNTGWQEMSRNWGQNWQSNSYLNGQSLCFKVTTSDGRTTVSYNVAPSNWQFGQTFEGREI
B8LMF3_______________LDSSWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLTCGACYEMKCNEETDPQWCLPGTVTVTATNFCPPNNALPNDNGGWCNPPLQHFDMAQPAYQQIAIYRGGIVPIMFRRVPCVRKGGVRFTINGHSYFNLVLITNVGGAGDVEAVSIKGSNSGWQAMSRNWGQNWQSNSYLNGQTLSFQVTTSDGRTVTSYNVAPANWQFGQTFEGLQL

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain