SustainPineDB

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Assembly info
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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene90924

Length: 360 nt

UniGene Fasta

>sp_v1.1_unigene90924
GCTGGTTGTTATTATGGTCCTTGTGTTTCTGTTTCTATGTTGTTGCAGGCGCACGGGACTATCTGCAACAGAATACGCGCCGGGAACGCTGACTGTATTCACTTACAGAGAGCTACAGGTCGCAACGAAGAATTTTTCTGAGCGTCTGGGAGGTGGGGGTTTCGGCTCCGTCTTCAAAGGGACTTTAGCAGATGGCTCTCCGGTGGCAGTTAAGAAGTTGGAGAGCGTGAGCCAAGGAGAAAAGCAATTTTGCATGGAGGTGAGTACCATCGGAGTAGCCCAGCATGTGAATTTGGTTAGGCTGCTTGGGTTTTGTACAGAGGGCTCCCAAAGACTGTTAGTGTACGAATACATGCCTAA

Ace file of the UniGene sp_v1.1_unigene90924

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	s-receptor kinase, putative	-	-	1.0e-28	69%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	53%
Blast2go	s-locus lectin protein kinase family protein	-	-	4.46089e-30	79%

Source	GOs	Term	Type	e value	Identity
Blast2go	transferase activity	GO:0016740	Molecular Function	4.46089e-30	79%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: B8LLV1

Fln msg: Distance to subject end: 244 aas, your sequence is shorter than subject: 119 - 607

Fln protein: LVVIMVLVFLFLCCCRRTGLSATEYAPGTLTVFTYRELQVATKNFSERLGGGGFGSVFKGTLADGSPVAVKKLESVSQGEKQFCMEVSTIGVAQHVNLVRLLGFCTEGSQRLLVYEYMP

Protein Length: 120

Fln nts: GCTGGTTGTTATTATGGTCCTTGTGTTTCTGTTTCTATGTTGTTGCAGGCGCACGGGACTATCTGCAACAGAATACGCGCCGGGAACGCTGACTGTATTCACTTACAGAGAGCTACAGGTCGCAACGAAGAATTTTTCTGAGCGTCTGGGAGGTGGGGGTTTCGGCTCCGTCTTCAAAGGGACTTTAGCAGATGGCTCTCCGGTGGCAGTTAAGAAGTTGGAGAGCGTGAGCCAAGGAGAAAAGCAATTTTGCATGGAGGTGAGTACCATCGGAGTAGCCCAGCATGTGAATTTGGTTAGGCTGCTTGGGTTTTGTACAGAGGGCTCCCAAAGACTGTTAGTGTACGAATACATGCCTAA

Fln Alignment:

sp_v1.1_unigene90924___TGLSATEYAPGTLTVFTYRELQVATKNFSER--LXXXXXXSVFKGTLADGSPVAVKKLESVSQ--GEKQFCMEVSTIGVAQHVNLVRLLGFCTEGSQRLLVYEYM
B8LLV1_______________SGEDDRKIAFGQLKRFSWRELQLATDNFSEKNVLGQGGFGKVYKGVLADNMKVAVKRLTDYHSPGGEQAFLREVEMISVAVHRNLLRLIGFCVAPSERLLVYPYM

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain