SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene90755

Length: 848 nt

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene90755

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Disease resistance protein n=1 Tax=Populus trichocarpa RepID=A9PFG4_POPTR	-	-	2.0e-26	29%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	66%
Blast2go	disease resistance protein	-	-	0.0	51%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: D5A9S3

Fln msg: Distance to subject end: 270 aas, your sequence is shorter than subject: 282 - 633

Fln protein: RGSLEPNSATKYGEYQIKPQDGFLEGMKDGNDQRPSVHQGALSQFQEIWSRSGVQKQVSEDYEKGNTIVFTGHSMGGGIAALATLRMLEMQPGLPKSVFEILARGVRRKKWADQFCHVVLRRDALSRILLVPSISVSKPLEALLPYWNRSMQSAADSMGSTDLPMAETLPGGIPEFVATVVQHCSAVSNYTSAAKMSPNNPLIAAVKPLVKLSPYRPFGYYLFCSSSGAIWVENHYAVLPILYFSLQTLEDFILQHVGYGYILPNALQNIVKFNELSDLPLS

Protein Length: 283

Fln nts: CGTGGCTCTCTGGAACCCAATTCAGCAACCAAATACGGAGAGTACCAAATTAAGCCTCAGGATGGTTTTCTTGAGGGAATGAAAGATGGAAATGACCAGAGACCCTCCGTCCACCAAGGTGCTCTCAGTCAATTTCAGGAGATTTGGAGTAGATCAGGCGTCCAAAAACAGGTCAGTGAGGATTATGAGAAGGGGAATACCATTGTGTTTACCGGCCACTCCATGGGAGGGGGTATTGCTGCGTTGGCCACTTTACGGATGTTGGAGATGCAGCCTGGCCTGCCTAAATCGGTATTTGAAATTCTGGCGCGAGGAGTTCGTCGCAAGAAGTGGGCGGATCAGTTCTGCCATGTTGTGTTGAGGCGCGATGCCCTCTCTAGGATTCTCTTGGTTCCTTCGATATCTGTTTCTAAGCCCTTAGAAGCTCTGTTACCCTATTGGAACAGATCCATGCAGAGCGCAGCGGATTCAATGGGTTCCACTGATTTACCTATGGCAGAAACCCTCCCAGGGGGCATTCCTGAATTTGTTGCCACTGTAGTCCAGCATTGTTCCGCTGTCTCGAATTATACCAGCGCTGCCAAAATGAGCCCCAACAACCCCTTGATAGCTGCTGTAAAGCCTCTGGTGAAGTTAAGTCCTTATAGGCCATTTGGGTATTATCTATTCTGTTCAAGTAGTGGCGCAATATGGGTAGAAAATCATTATGCTGTGTTACCCATCCTCTATTTCTCCCTACAGACGTTAGAGGACTTCATCTTACAGCATGTTGGTTATGGCTATATCTTACCCAATGCCCTGCAAAACATCGTGAAATTCAATGAGCTTTCAGATCTTCCGTTGTCTGA

Fln Alignment:

sp_v1.1_unigene90755___RGSLEP----NSATKYGEYQIKPQDGFLEGMKDGNDQRPSVHQGALSQFQEIWSRSGVQKQVSEDYEKGNTIVFTGHSMGGGIAALATLRMLE--MQPGLPKSVF-----------EILARGVRRKKWADQFCHVVLRRDALSRILLVPSISVSKPLEALLPYWNRSMQSAADSMGSTDLPMAETLPGGIPEFVATVVQHCSAVSNYTSAAKMSPNNPLIAAVKPLVKLSPYRPFGYYLFCSSSGAIWVENHYAVLPILYFSLQT----LEDFILQHVGYGYILPNALQNIVKFNELSDLPLS
D5A9S3_______________RGSLDPQVVTSATTKYGECHIHDID-CLEWMKDGNNQPASVHKGAFSQFLDIWNNSPLQEEAGLDCERGKTVVFTGHSMGGAIASLATLCMLDKQLQPGKPKSIFCITFGFPLIGDEVVARAVRRKRWADQFCHVVLGRDAFSRILLAPCISVRKPLEALLPYLKRSMQSAGDSMGSTDTPMEEALPEGIAEFVGTVIQHCSAVVNYSSAAKMSPNNPSIAVVKSLVKLSPYRPFGHYVFCSRTGGISIENHFAVLPILYYALQTSDVNSEQFILEHVGYNHILPNALQNIVKLQELSDLPLS

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain