SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene90643

Length: 1349 nt

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene90643

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Voltage-dependent anion channel protein n=1 Tax=Spinacia oleracea RepID=Q41368_SPIOL	-	-	68%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	77%
Blast2go	porin voltage-dependent anion-selective channel protein	-	-	82%

Full-Lengther Next Prediction

Fln status: Complete

Fln database: coniferopsida.fasta

Fln subject: A9NU89

Fln msg:

Fln protein: MVKGPGLFSDIGKKSRDLLYKDFLVDQKFSLTTYTPTGLVFTSTGTKKGELFLGDLTTQLKNKNVTTDIKVDTSSNLFATVTIDEPTPGLKAILSFTVPDQRSGKVELQYLHDYAGISTSIGLTATPVVETSVVIGNESVALGGEFAFDTASSNFTKYNAGLNFVQPDFISSLNLTDRGDTLKASYLHIVSPLTKTAVGAEIAHSISRNENIFTMGTQHAFDPFTTVKARLNNHGKIAALVQHEWRPKSLITLSGEVDSKALDNSSKIGLSLVLKP*

Protein Length: 278

Fln nts: GGCATACAGACCATATAAGAACCAACGGCCACGATAGCTGGACAGCAGCATCTCCATAAAATCAACTGTCAAGATTTCAGCTTTGAGTCAGAATATTCTCGAAAGCATATGCTCGGGTTTTGGGGGTTTATGCTCTTCATTCCGTCTTCTGCCATTCTCCGCCCACTGTCTCTTCTCGAGCACCAAACGATCAGGTTTTGTTAACGGGTTGTGGACTCGCAACA_-_ATGGTGAAGGGACCTGGTTTGTTCTCTGACATTGGCAAGAAAAGCCGAGATCTCCTTTATAAGGATTTCCTGGTTGACCAAAAGTTTAGTCTAACCACCTACACTCCCACCGGATTGGTCTTTACGTCCACTGGTACCAAGAAAGGGGAGCTTTTTCTTGGGGATCTCACGACACAGTTGAAGAATAAAAATGTTACAACTGATATTAAAGTGGATACAAGCTCCAATTTATTTGCAACTGTGACAATCGATGAACCCACACCAGGATTGAAAGCTATTCTTAGCTTCACTGTCCCAGACCAGAGATCTGGCAAGGTTGAGCTTCAATACCTTCATGATTATGCCGGGATCAGTACAAGTATAGGCTTAACAGCAACTCCTGTTGTGGAGACTTCTGTAGTCATCGGGAATGAAAGTGTTGCTCTTGGGGGCGAGTTTGCTTTTGATACTGCATCAAGCAACTTTACGAAATACAATGCAGGCTTAAACTTTGTGCAGCCAGATTTCATTTCTTCTTTGAATTTAACGGACAGAGGTGATACATTGAAGGCATCTTACTTGCACATTGTGAGCCCTCTGACAAAGACTGCAGTTGGAGCCGAGATTGCCCACAGTATTTCAAGGAATGAGAATATTTTCACCATGGGTACTCAACATGCTTTCGATCCCTTTACAACTGTAAAGGCACGCTTGAATAACCACGGAAAAATTGCTGCCCTTGTCCAGCATGAATGGAGGCCAAAGTCTTTGATAACTCTTTCCGGGGAAGTAGACAGCAAGGCTCTTGATAACAGTTCTAAGATAGGTCTATCTCTGGTTTTGAAACCATGA___AAGGAGTCTTGAAAATTACTTCATAATTGTTTTTCATAAACCATGGACTACGGACTTTACTATGCTCTGTGGTCCATTTGAGACTGCATCCTATTTAGTGCCCACATTTTGTGTTGTAGGCTGGCACTGTAGCGACATTGTTCAGTGCTTGGTAGTTTGCACTTATAGATTCCCGTAATTATCTTACAAGTTTGAGACTGGTGAGGTTTGAAGATGTCCGTTGGAGAATATTATGGCAGGTTAATAACATATGACTGCTATGTGCAGTGAAGTCAGCAGAAGTAAAAAAATCTG

Fln Alignment:

sp_v1.1_unigene90643___MVKGPGLFSDIGKKSRDLLYKDFLVDQKFSLTTYTPTGLVFTSTGTKKGELFLGDLTTQLKNKNVTTDIKVDTSSNLFATVTIDEPTPGLKAILSFTVPDQRSGKVELQYLHDYAGISTSIGLTATPVVETSVVIGNESVALGGEFAFDTASSNFTKYNAGLNFVQPDFISSLNLTDRGDTLKASYLHIVSPLTKTAVGAEIAHSISRNENIFTMGTQHAFDPFTTVKARLNNHGKIAALVQHEWRPKSLITLSGEVDSKALDNSSKIGLSLVLKP
A9NU89_______________MGKGPGLYSDIGKKTRDLLNKDYNFDQKFSFTSYTSTGLAFTSTGIKKGEFFLGDLNTQLKNNNVTTDIKVDTSSNLFATVTIDEPAPGLKTILSFTVPDQRSGKVELQYLHDYAGVSTSIGLTPSPITHFSGVIGNDTFSVGGEVSFDTASGNFLKYDAGLSFSKPDFVSSLTLTGKGDTLKASYLHTVSPLTKTAVGAEISHSFSRSENTFTIGTQHALDPLTTVKGRLNNYGKAAALLQHEWRPKSFVTLSGEVDTKALHNSAKVGLSLILKP

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain